PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021663312.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 264aa    MW: 30477.6 Da    PI: 8.3639
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021663312.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.91.3e-281764451
                    -SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    en   rqvtfskRrng+lKKA+ELSvLCdaevavi+fsstgklye+ss
  XP_021663312.1 17 ENLNSRQVTFSKRRNGLLKKAKELSVLCDAEVAVIVFSSTGKLYEFSS 64
                    78899*****************************************96 PP
2K-box60.47.5e-219517916100
           K-box  16 slqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                       + +++ Lk+e+++L+ +  +++G+++++Ls+keL++Le+qL ++l ++ +kK++ l+e+ e+l+k+e++  een++Lrk++ee
  XP_021663312.1  95 AHRAKVNALKDEVSQLRLTCLQMMGQQIDRLSFKELHHLERQLSEGLLSVEDKKEQKLIEENEKLRKQEQKFIEENEKLRKQVEE 179
                     45678999**************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MTEERKTMCR GKIKKPENLN SRQVTFSKRR NGLLKKAKEL SVLCDAEVAV IVFSSTGKLY  60
EFSSTSMKNT HTRYCKGVDL EWLELSPDEH EIENAHRAKV NALKDEVSQL RLTCLQMMGQ  120
QIDRLSFKEL HHLERQLSEG LLSVEDKKEQ KLIEENEKLR KQEQKFIEEN EKLRKQVEEL  180
QRSSSLSKST FLEFNPFERR FFIARTAKTA SYDGGEKEEE SDNEISVTSL QLRLSCDGIK  240
KKKASKSESL CNDSGSQVGL EKFT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57390.12e-50MIKC_MADS family protein