PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021662719.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 493aa MW: 54179.9 Da PI: 6.5609

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021662719.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	32.9	1.6e-10	216	273	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...krkrfslgkfgtaeeAakaaiaarkklege 56 s y+GV++++++gr++A+++d + rk + g ++ +e+Aa+a++ a++k++g+ XP_021662719.1 216 SIYRGVTRHRWTGRYEAHLWDnSCR-RegqARKGRQ-GGYDREEKAARAYDLAALKYWGH 273 57*****************5444.2344336655.779999************997 PP
2	AP2	50.3	5.9e-16	315	366	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_021662719.1 315 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 366 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MAPATNWLSF SLSPMEMLRS SESQFIYEGS STASPHYLMD NFYANGWGSS KEAQGVTTMA 60 EASILTSFID PEAHHPQAPK LEDFLGDSSS IVRYSDNSQT ETQDSSLTHI YDHGSAAYFN 120 DQQDLKAIAG FQAFSTNSGS EVDDSASMAR TQIVGGEFVG HSIESSGNEL GFSNCTGGNN 180 ALSLGISNQS SAEKAIVPAE SDCPKKIAET FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR 240 REGQARKGRQ GGYDREEKAA RAYDLAALKY WGHTATTNFP VANYTKELEE MKYVSKQEFI 300 ASLRRKSSGF SRGASIYRGV TRHHQQGRWQ ARIGRVAGNK DLYLGTFATE EEAAEAYDIA 360 AIKFRGMNAV TNFEMSRYDV AAIMKSALPI GGAAKRLKLS LEVEQKPTLN HEQQPRGGSN 420 NINFASMPLD SAIPCGIPFE NTAALYHHSL IHHIQSANNF GGTDSSGSTS SMATPMTLLP 480 QTTDFFMWPH QSY

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MAPATNWLSF SLSPMEMLRS SESQFIYEGS STASPHYLMD NFYANGWGSS KEAQGVTTMA  60
EASILTSFID PEAHHPQAPK LEDFLGDSSS IVRYSDNSQT ETQDSSLTHI YDHGSAAYFN  120
DQQDLKAIAG FQAFSTNSGS EVDDSASMAR TQIVGGEFVG HSIESSGNEL GFSNCTGGNN  180
ALSLGISNQS SAEKAIVPAE SDCPKKIAET FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR  240
REGQARKGRQ GGYDREEKAA RAYDLAALKY WGHTATTNFP VANYTKELEE MKYVSKQEFI  300
ASLRRKSSGF SRGASIYRGV TRHHQQGRWQ ARIGRVAGNK DLYLGTFATE EEAAEAYDIA  360
AIKFRGMNAV TNFEMSRYDV AAIMKSALPI GGAAKRLKLS LEVEQKPTLN HEQQPRGGSN  420
NINFASMPLD SAIPCGIPFE NTAALYHHSL IHHIQSANNF GGTDSSGSTS SMATPMTLLP  480
QTTDFFMWPH QSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.2	0.0	AP2 family protein