PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021662458.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 293aa MW: 32255.6 Da PI: 8.3324

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021662458.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.7	0.00083	227	249	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg +Fs+ L+ H ++ H XP_021662458.1 227 ECPQCGARFSSVTVLVEHVQKvH 249 5*****************99988 PP
2	zf-C2H2	16.9	1.8e-05	265	287	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C+k F+++ L+ H + H XP_021662458.1 265 VCPKCSKGFRDPVALVEHVERdH 287 7*****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MGTPQFPDLG KHCTKEDCKQ IDFLPFTCDR CRQVFCLEHR SYSKHSCPKA DGKDVTVVIC 60 PLCAKGVRLN PDEDPNISWE THVNTECDPS NYEKVTKKRK CPVRGCREVL TFSNTIKCRD 120 CTIDHCLKHR FGPDHDCPGP KKIEVGFQFL SLLNRSRKDE SKPNRTPAAS STKWASAFRN 180 AASTVRASAE AGVAKLSTEI SQAWQTAKNT AGPSSSSGGD AIGLEEECPQ CGARFSSVTV 240 LVEHVQKVHE RGGNQSRVLK LPVDVCPKCS KGFRDPVALV EHVERDHGGT SKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	1e-128	C2H2 family protein