PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021662145.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 207aa MW: 23642.7 Da PI: 6.2979 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.8 | 1.2e-18 | 18 | 65 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l+++++ +G+++Wkt+a + g++R++k+c++rw++yl XP_021662145.1 18 KGAWTGEEDRKLAEYIEVHGPKRWKTVAMKAGLNRCGKSCRLRWLNYL 65 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.8 | 8.8e-17 | 71 | 116 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_021662145.1 71 RGNISDEEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 116 7899******************.*********.************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 207 aa Download sequence |
MAPKNSEAST NSKMVMNKGA WTGEEDRKLA EYIEVHGPKR WKTVAMKAGL NRCGKSCRLR 60 WLNYLRPNIK RGNISDEEED LILRLHKLLG NRWSLIAGRL PGRTDNEIKN YWNSHLSKKI 120 NKKEKKPAEC STPQDNITEK TCEAVATGQE TVEESSKGAA IPELSFDLSF DVNELFDLST 180 QGTYDLEWVN KFLELDEDPW LAVAEDR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G13540.1 | 2e-52 | MYB family protein |