PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021661674.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 363aa MW: 42542.6 Da PI: 8.6429

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021661674.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18	7.7e-06	63	83	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cg F+ + +Lk+H+++H XP_021661674.1 63 CQECGAIFKKPAYLKQHMQSH 83 *******************99 PP
2	zf-C2H2	19.7	2.2e-06	89	113	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ dC+ s++rk++L+rH+ tH XP_021661674.1 89 YVCSvdDCHASYRRKDHLTRHLLTH 113 99*********************99 PP
3	zf-C2H2	12.5	0.00044	118	143	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp +C+ F + n krH + H XP_021661674.1 118 FKCPtgNCNIEFVFQGNVKRHVKElH 143 89********************9988 PP
4	zf-C2H2	16.4	2.5e-05	158	181	2	23
EET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirtH 23 +C+ Cgk+F+ +s L++H +H XP_021661674.1 158 VCQetGCGKVFRYPSRLRKHEDSH 181 588889**************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MEDSVEIERP RTIFRRYFCD YCGICRSKKS LINFHIQTQH KEEMDKVKAN ENEEMEVVKS 60 NACQECGAIF KKPAYLKQHM QSHSLLRPYV CSVDDCHASY RRKDHLTRHL LTHEGKLFKC 120 PTGNCNIEFV FQGNVKRHVK ELHSEDSPSA KCGQKQRVCQ ETGCGKVFRY PSRLRKHEDS 180 HVKLESVEAF CAEPGCMKHF SNAQCLKDHI QSCHRYMTCE ICGRKQLKKN FKRHLRTHDA 240 VCWSMKRIRC HFENCCHTFS NKTNLNVHVK AVHLEVRPFT CGFPGCDVRF AYKHVRDKHE 300 QSGCHVYTPG DFEESDEQFR SRPQGGRKRK CPTVEMLIRK RVTPPTDLDP FHAWFQSNEG 360 EDQ

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MEDSVEIERP RTIFRRYFCD YCGICRSKKS LINFHIQTQH KEEMDKVKAN ENEEMEVVKS  60
NACQECGAIF KKPAYLKQHM QSHSLLRPYV CSVDDCHASY RRKDHLTRHL LTHEGKLFKC  120
PTGNCNIEFV FQGNVKRHVK ELHSEDSPSA KCGQKQRVCQ ETGCGKVFRY PSRLRKHEDS  180
HVKLESVEAF CAEPGCMKHF SNAQCLKDHI QSCHRYMTCE ICGRKQLKKN FKRHLRTHDA  240
VCWSMKRIRC HFENCCHTFS NKTNLNVHVK AVHLEVRPFT CGFPGCDVRF AYKHVRDKHE  300
QSGCHVYTPG DFEESDEQFR SRPQGGRKRK CPTVEMLIRK RVTPPTDLDP FHAWFQSNEG  360
EDQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	322	330	RPQGGRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-145	C2H2 family protein