PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021660709.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 792aa MW: 87750.3 Da PI: 6.8224

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021660709.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.3	4e-09	52	94	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+e + a +q G++ +++I r+++ + q++++++ + XP_021660709.1 52 AWTREEEESFFTALRQVGKN-FEKITRRVQ-SKNKDQVRHYYYRL 94 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 792 aa Download sequence
MEMESQVSLD STVHSHNENT SIQHGDTGIT SSIPDHVKPQ QPAKKPTRQW AAWTREEEES 60 FFTALRQVGK NFEKITRRVQ SKNKDQVRHY YYRLVRRMNK LLGPGLCLDA KNSKDTNAAM 120 LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LENQLLKDRK KNVRKRPSQV ENVSPPVPST 180 VTSQNRASTH ETRTVKLVLV DSQNLQRLGA GKGSLKRNVN IGVIRGNRGD STAMKPARQR 240 RKQAAYKKWE KAAIAGVSLV ADAAEHLERT ATDKEIEPDH HMAEHKSPDA IEKGLPPLSA 300 FSQNHYVNAQ TNMKLKLQLF PIDDGTRRAL EMDKHNPHLE LTLSTRKKIS SVLEHLNRKW 360 GNSSIASGEL MLFPYSALRE NLVGNQRWTQ DSIVSALDVY TSIGSPSVFR LRYGWFSNIE 420 LASVTLQAPS ASSSIPGGNS IDMENEKRKT VDSITTSGLS TNDRSEKNMD LCKDQLSTGI 480 KSHDYALSST DVPNDLSGYI ATGPRNNFDG SLDPAAKVSW HEKETGDRTN MKQSDAAGHL 540 RLYNGTALSA GEWADSLTNI SVGDLLSEVP HDVDPNCIEL SIAQSSQCLQ QIPFSCDSFD 600 AAIAAHMSRH QNKIVSPSTV ASHTFSIWDA EETCDAFSFQ KNHALHQEIP TSIDAVSPGA 660 GKQTNSMVSG AFVEGLPSGE GPVDYPAETE PMDDCSPDPL VVDNLTKDFT GLTDIYWPES 720 LGPLDLDIPS SKYHSEEFIL NDSLSGLNRL IASSLDAFQN CSFFGLDEKD SIPVVEARET 780 SSFSDFKIGS GV

Sequence ? help Back to Top

Protein Sequence Length: 792 aa Download sequence

MEMESQVSLD STVHSHNENT SIQHGDTGIT SSIPDHVKPQ QPAKKPTRQW AAWTREEEES  60
FFTALRQVGK NFEKITRRVQ SKNKDQVRHY YYRLVRRMNK LLGPGLCLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LENQLLKDRK KNVRKRPSQV ENVSPPVPST  180
VTSQNRASTH ETRTVKLVLV DSQNLQRLGA GKGSLKRNVN IGVIRGNRGD STAMKPARQR  240
RKQAAYKKWE KAAIAGVSLV ADAAEHLERT ATDKEIEPDH HMAEHKSPDA IEKGLPPLSA  300
FSQNHYVNAQ TNMKLKLQLF PIDDGTRRAL EMDKHNPHLE LTLSTRKKIS SVLEHLNRKW  360
GNSSIASGEL MLFPYSALRE NLVGNQRWTQ DSIVSALDVY TSIGSPSVFR LRYGWFSNIE  420
LASVTLQAPS ASSSIPGGNS IDMENEKRKT VDSITTSGLS TNDRSEKNMD LCKDQLSTGI  480
KSHDYALSST DVPNDLSGYI ATGPRNNFDG SLDPAAKVSW HEKETGDRTN MKQSDAAGHL  540
RLYNGTALSA GEWADSLTNI SVGDLLSEVP HDVDPNCIEL SIAQSSQCLQ QIPFSCDSFD  600
AAIAAHMSRH QNKIVSPSTV ASHTFSIWDA EETCDAFSFQ KNHALHQEIP TSIDAVSPGA  660
GKQTNSMVSG AFVEGLPSGE GPVDYPAETE PMDDCSPDPL VVDNLTKDFT GLTDIYWPES  720
LGPLDLDIPS SKYHSEEFIL NDSLSGLNRL IASSLDAFQN CSFFGLDEKD SIPVVEARET  780
SSFSDFKIGS GV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.3	0.0	MYB_related family protein