PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021660702.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 797aa MW: 88205.8 Da PI: 6.8224

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021660702.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.3	4.1e-09	52	94	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+e + a +q G++ +++I r+++ + q++++++ + XP_021660702.1 52 AWTREEEESFFTALRQVGKN-FEKITRRVQ-SKNKDQVRHYYYRL 94 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 797 aa Download sequence
MEMESQVSLD STVHSHNENT SIQHGDTGIT SSIPDHVKPQ QPAKKPTRQW AAWTREEEES 60 FFTALRQVGK NFEKITRRVQ SKNKDQVRHY YYRLVRRMNK LLGPGLCLDA KNSKDTNAAM 120 LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LENQLLKDRK KNVRKRPSQV ENVSPPVPST 180 VTSQNRASTH ETRTVKLVLV DSQNLQRLGA GKGSLKRNVN IGVIRGNRGD STAMKPARQR 240 RKQGVVLSAA YKKWEKAAIA GVSLVADAAE HLERTATDKE IEPDHHMAEH KSPDAIEKGL 300 PPLSAFSQNH YVNAQTNMKL KLQLFPIDDG TRRALEMDKH NPHLELTLST RKKISSVLEH 360 LNRKWGNSSI ASGELMLFPY SALRENLVGN QRWTQDSIVS ALDVYTSIGS PSVFRLRYGW 420 FSNIELASVT LQAPSASSSI PGGNSIDMEN EKRKTVDSIT TSGLSTNDRS EKNMDLCKDQ 480 LSTGIKSHDY ALSSTDVPND LSGYIATGPR NNFDGSLDPA AKVSWHEKET GDRTNMKQSD 540 AAGHLRLYNG TALSAGEWAD SLTNISVGDL LSEVPHDVDP NCIELSIAQS SQCLQQIPFS 600 CDSFDAAIAA HMSRHQNKIV SPSTVASHTF SIWDAEETCD AFSFQKNHAL HQEIPTSIDA 660 VSPGAGKQTN SMVSGAFVEG LPSGEGPVDY PAETEPMDDC SPDPLVVDNL TKDFTGLTDI 720 YWPESLGPLD LDIPSSKYHS EEFILNDSLS GLNRLIASSL DAFQNCSFFG LDEKDSIPVV 780 EARETSSFSD FKIGSGV

Sequence ? help Back to Top

Protein Sequence Length: 797 aa Download sequence

MEMESQVSLD STVHSHNENT SIQHGDTGIT SSIPDHVKPQ QPAKKPTRQW AAWTREEEES  60
FFTALRQVGK NFEKITRRVQ SKNKDQVRHY YYRLVRRMNK LLGPGLCLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LENQLLKDRK KNVRKRPSQV ENVSPPVPST  180
VTSQNRASTH ETRTVKLVLV DSQNLQRLGA GKGSLKRNVN IGVIRGNRGD STAMKPARQR  240
RKQGVVLSAA YKKWEKAAIA GVSLVADAAE HLERTATDKE IEPDHHMAEH KSPDAIEKGL  300
PPLSAFSQNH YVNAQTNMKL KLQLFPIDDG TRRALEMDKH NPHLELTLST RKKISSVLEH  360
LNRKWGNSSI ASGELMLFPY SALRENLVGN QRWTQDSIVS ALDVYTSIGS PSVFRLRYGW  420
FSNIELASVT LQAPSASSSI PGGNSIDMEN EKRKTVDSIT TSGLSTNDRS EKNMDLCKDQ  480
LSTGIKSHDY ALSSTDVPND LSGYIATGPR NNFDGSLDPA AKVSWHEKET GDRTNMKQSD  540
AAGHLRLYNG TALSAGEWAD SLTNISVGDL LSEVPHDVDP NCIELSIAQS SQCLQQIPFS  600
CDSFDAAIAA HMSRHQNKIV SPSTVASHTF SIWDAEETCD AFSFQKNHAL HQEIPTSIDA  660
VSPGAGKQTN SMVSGAFVEG LPSGEGPVDY PAETEPMDDC SPDPLVVDNL TKDFTGLTDI  720
YWPESLGPLD LDIPSSKYHS EEFILNDSLS GLNRLIASSL DAFQNCSFFG LDEKDSIPVV  780
EARETSSFSD FKIGSGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.2	0.0	MYB_related family protein