PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021660639.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | C3H | ||||||||
Protein Properties | Length: 604aa MW: 67802.6 Da PI: 7.1699 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 17.9 | 5.5e-06 | 321 | 335 | 12 | 26 |
TS--TTTTT-SS-SS CS zf-CCCH 12 tGtCkyGdrCkFaHg 26 +G C++G++C+F H+ XP_021660639.1 321 SGSCPRGEKCHFQHD 335 69************7 PP | |||||||
2 | zf-CCCH | 18.2 | 4.4e-06 | 346 | 367 | 5 | 26 |
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 C +f+ G C +G+ C+F H+ XP_021660639.1 346 VCIDFLIKGKCERGPDCNFKHD 367 5********************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 604 aa Download sequence |
MAPPRILLCG DVLGRLNHLY KRVQSVNKSA GPFDALFCVG QFFPGSPELL EEFMDYVEGR 60 TQIPLPTYFI GDYGVGAPKV LSVASKNSSN LGFKMDGLKI CENLFWLRGS GKFTLYSLSV 120 AYLSGRRSSD SQQFGTYSQD DVDALRALAD EPGIVDLFLT NEWPTGVTNR ATSDIPAGIS 180 DSAGSDSTIS ELVAEIKPRY HIAGAKGVFY AREPYSNIDA VHVTRFFGLA SVGNNDKQKF 240 IHAISPTPGS TMTAVEISMK PSNTTSSPYT FSEQTVHPKE TTKRPSDSVS DSQYWRYDVS 300 QKRQKAGARD GDKLCFKFIY SGSCPRGEKC HFQHDMDARE QYLRGVCIDF LIKGKCERGP 360 DCNFKHDLQS KVESYSHRRH GSENANRSKE CWFCLSSPSV ESHLIISIGE SYYCALAKGP 420 LVQDHVLLIP IEHSPSTLSL PQECESELVR FKNNLKLYFK NGGKEAIIFE WVSKRGTHAN 480 LQAAPVPSSR VAAVQDIFNM AADKLGFKFV AMKFDNSSDS RKWLRAQFDR NYSFFYVELP 540 DGTILSHLIE ENERFPVQFG REVLAGLLNT PERADWRTCK LSKEEETKMV EEFQKKFEEL 600 DPTR |