PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021660586.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 355aa    MW: 39967.2 Da    PI: 7.9909
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021660586.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF641.7e-201558245
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    + en+  rq t+ kR++gi+KKA+ELS+LCd+++ +++fs+tgk
  XP_021660586.1 15 KLENTNGRQATYGKRKHGIMKKAKELSILCDIDIILLMFSPTGK 58
                    6799**************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MQPYMMGRVK LKIKKLENTN GRQATYGKRK HGIMKKAKEL SILCDIDIIL LMFSPTGKPS  60
ICKGKRSIEE VIAKFAQLTP QERAKRKLES LEALKKTFKK LDHDVNIPEF LGTSSQTMED  120
LSNQSRLLQN QLSEVHKRLS YWTNPDKINN IEHLGQLENS LRESLNKIQA HKFQNGMHVP  180
FRIGAEQQLP PMPWIPNNDS QQIVLPEDPN LLPNRDVECS ASSSFGSYSG YFGTGKSSEL  240
SNSSQENGVN GILNDLSGTA SLRLQLAGQY PYMPYNLNLL NDTKFQSAAE MNLQESPVDF  300
HVNGSFEAPK PGYDSNPGSW ASSSGPCAVT MFDEHLYSQK DHLYGSNNEE YYRIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03060.22e-83M-type_MADS family protein