PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021660584.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 371aa    MW: 41820.2 Da    PI: 7.5868
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021660584.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF63.91.8e-201558245
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    + en+  rq t+ kR++gi+KKA+ELS+LCd+++ +++fs+tgk
  XP_021660584.1 15 KLENTNGRQATYGKRKHGIMKKAKELSILCDIDIILLMFSPTGK 58
                    6799**************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MQPYMMGRVK LKIKKLENTN GRQATYGKRK HGIMKKAKEL SILCDIDIIL LMFSPTGKPS  60
ICKGKRSIEE VIAKFAQLTP QERAKRKLES LEALKKTFKK LDHDVNIPEF LGTSSQTMED  120
LSNQSRLLQN QLSEVHKRLS YWTNPDKINN IEHLGQLENS LRESLNKIQA HKEYLGKQQL  180
MSLECNSQFQ NGMHVPFRIG AEQQLPPMPW IPNNDSQQIV LPEDPNLLPN RDVECSASSS  240
FGSYSGYFGT GKSSELSNSS QENGVNGILN DLSGTASLRL QLAGQYPYMP YNLNLLNDTK  300
FQSAAEMNLQ ESPVDFHVNG SFEAPKPGYD SNPGSWASSS GPCAVTMFDE HLYSQKDHLY  360
GSNNEEYYRI S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03060.23e-89M-type_MADS family protein