PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021660255.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 328aa MW: 37493.1 Da PI: 9.9433 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 43.7 | 3.6e-14 | 11 | 51 | 3 | 43 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43 i n+ r +t+ kR++g+ KK +E +LCd++++vii++++ XP_021660255.1 11 ITNEKSRMITYQKRKKGLTKKLQEFHILCDVDACVIILGPN 51 899***********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MGRGKLNMEL ITNEKSRMIT YQKRKKGLTK KLQEFHILCD VDACVIILGP NFNNRPIDVE 60 TWPTDRFDMR RIINRYRSQD KERRKNQDLS SFFVARQKKL DDEIAKMRKA CLKAKFPAWD 120 NRLNLLQSSE LNVLAGVLDS KLEVATSMVL KSKGDHYLMF GSRPEIIEGG YSSNNNFKSS 180 SLASTFANAL QQKKMELEVF KPEPLTFVNA SDQNLPQMLP FNVNPLNSPM LMMMMMANGD 240 NYFSQFVGEC SSSKRSPWSP VKAPAYSFDH PAANAMMMNN NPWAHSGSYC GLSRQSVLPS 300 NVSSHVHIPQ FSHLFDINEF EMKNKKPQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 80 | 86 | DKERRKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G55690.1 | 1e-22 | M-type_MADS family protein |