PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021659825.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 510aa MW: 56331.8 Da PI: 6.8851

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021659825.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.3	6.9e-17	159	208	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_021659825.1 159 SQYRGVTYYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 208 78*****************......55**********************997 PP
2	AP2	43.8	6.4e-14	251	301	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g XP_021659825.1 251 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 301 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MWDLNDSPDR RRDDESEGCS SQKTSLDGED DKGKRVGSVS NSSSSAVVIE DGSEEDGSGE 60 RGRIKKRTSK IFGFSVAHDD SMESDPPVTR QFFPVEDQEM GATSGGSGSG GGGGSGAGFP 120 RAHWVGVKFC QSESLASPKS VEVSQPLKKS RRGPRSRSSQ YRGVTYYRRT GRWESHIWDC 180 GKQVYLGGFD TAHAAARAYD RAAIKFRGVE ADINFGIEDY EEDLKQMSNL TKEEFVHVLR 240 RQSTGFPRGS SKYRGVTLHK CGRWEARMGQ FLGKKYVYLG LFDTEIEAAR AYDKAAIKCN 300 GKEAVTNFDP SIYENEINSA ETSGCAADHN LDLSLGNSGL KQNGVGLSND RQNAEMDPQS 360 ASLPFEADWR NAGIRPKLNL YRSSESDDHR REGYSETETM QLLSQTHIQS PGNEAQIYGQ 420 LRRPGETQML HGFSPNYQFP SSSNGGRIGS DLSLSPSDYH HHQQQQWQSG PPPPQQLVAN 480 AAASSGFPQQ IRTPQNWLQK NGFHSILRLS

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MWDLNDSPDR RRDDESEGCS SQKTSLDGED DKGKRVGSVS NSSSSAVVIE DGSEEDGSGE  60
RGRIKKRTSK IFGFSVAHDD SMESDPPVTR QFFPVEDQEM GATSGGSGSG GGGGSGAGFP  120
RAHWVGVKFC QSESLASPKS VEVSQPLKKS RRGPRSRSSQ YRGVTYYRRT GRWESHIWDC  180
GKQVYLGGFD TAHAAARAYD RAAIKFRGVE ADINFGIEDY EEDLKQMSNL TKEEFVHVLR  240
RQSTGFPRGS SKYRGVTLHK CGRWEARMGQ FLGKKYVYLG LFDTEIEAAR AYDKAAIKCN  300
GKEAVTNFDP SIYENEINSA ETSGCAADHN LDLSLGNSGL KQNGVGLSND RQNAEMDPQS  360
ASLPFEADWR NAGIRPKLNL YRSSESDDHR REGYSETETM QLLSQTHIQS PGNEAQIYGQ  420
LRRPGETQML HGFSPNYQFP SSSNGGRIGS DLSLSPSDYH HHQQQQWQSG PPPPQQLVAN  480
AAASSGFPQQ IRTPQNWLQK NGFHSILRLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-108	AP2 family protein