PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021659586.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 461aa    MW: 51602.1 Da    PI: 5.7653
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021659586.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS301.42.2e-92544582373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalkl..fsevsPil 91 
                     ++lL++cA+a++s+d++laq++L+ l+++a pdgd++qRl+  f++AL ar a+  s+++k l++ ++++ +    ++++++ +l  f++++P++
  XP_021659586.1  54 EQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCAFLRALIARAAK--SGTCKLLAAMANAHCTlaiDTHKFSVIELagFVDLTPWH 146
                     79****************************************************..6777777666666555433445555555589******** PP

            GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl.. 181
                     +f++ +aN aIlea+eg + vHi+D+++++++Q p+L++a+a+R e +p +++T+ g+ e        ++ee+g++L +fA++ +v +ef+v+  
  XP_021659586.1 147 RFGFTAANAAILEAIEGYSSVHIVDLSMTHCMQIPTLIDAIANRFEVTPLIKLTVAGATEDIppmLDLSYEELGSKLINFARSRNVIMEFRVVps 241
                     **********************************************************776698888999**********************987 PP

            GRAS 182 .vakrledleleeLrvkp......gEalaVnlvlqlhrll.....................desvsleserdevLklvkslsPkvvvvveqeadh 248
                      +++ +++l +e+Lrv++      gEal++n+++ lh+++                     ++  s++s r+ +Lk ++sl P++vv+v++++d+
  XP_021659586.1 242 sYTDGFSSL-IEHLRVQNmvyaesGEALVINCQMLLHYIPeetlfgvitstnssnpysfesSSCSSMSSLRTMFLKSLRSLDPTIVVLVDEDVDL 335
                     744455555.66666666666669***********************************97666778889************************* PP

            GRAS 249 nsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrk 343
                     +s++++ r+ +a++y +  +d++++ lpr s++r+++E+  + ++i+nv+a+eg +r+er e +++W +r+++a F+++++ e+a++++k++l +
  XP_021659586.1 336 TSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAD-ICWKIENVIAHEGLQRVERLEPKNRWVQRMRNANFRSISFCEDAVSEVKTMLGE 429
                     ****************************************.****************************************************** PP

            GRAS 344 vksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     ++  g+ +++e++ lvl+Wk++++v+++aW
  XP_021659586.1 430 HA-AGWGLKKEEEDLVLTWKGHNVVFATAW 458
                     **.899************************ PP
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    
MMQFTETPPP PLHQITAPFS NPNMNKNQTQ RTRPWPGFPT SKALGSFGDA NCMEQLLVHC  60
ANAIESNDAT LAQQILWVLN NIAPPDGDSN QRLTCAFLRA LIARAAKSGT CKLLAAMANA  120
HCTLAIDTHK FSVIELAGFV DLTPWHRFGF TAANAAILEA IEGYSSVHIV DLSMTHCMQI  180
PTLIDAIANR FEVTPLIKLT VAGATEDIPP MLDLSYEELG SKLINFARSR NVIMEFRVVP  240
SSYTDGFSSL IEHLRVQNMV YAESGEALVI NCQMLLHYIP EETLFGVITS TNSSNPYSFE  300
SSSCSSMSSL RTMFLKSLRS LDPTIVVLVD EDVDLTSNNL VCRLRSAFNY LWIPYDTVDT  360
FLPRGSKQRQ WYEADICWKI ENVIAHEGLQ RVERLEPKNR WVQRMRNANF RSISFCEDAV  420
SEVKTMLGEH AAGWGLKKEE EDLVLTWKGH NVVFATAWMP A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.10.0GRAS family protein