PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021659491.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 354aa MW: 39326.1 Da PI: 6.5129

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021659491.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.8	2.2e-14	165	211	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN+ +++Lr+llP+ +K +Ka+ L ++++++k+L XP_021659491.1 165 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 211 79***********************9.....8**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MCGFKEEDQG ECSQTIHNFQ GYQEQLLLQH HQQMQQQQQQ QSNDIYGGAR GSGLIFPEVS 60 PILPWSLPPV HSFNPDHFSS SHPVRDHDQF LIPPPVPSSY GSLFNRRAPA LQFAYDGSSS 120 DHLRIISETL GPVVQPGSAP FGLQAELGKM TAQEIMDAKA LAASKSHSEA ERRRRERINN 180 HLAKLRSLLP STTKTDKASL LAEVIQHVKE LKRQTSLIAE TSPVPTEIDE LTLDTSDEDG 240 KFVIKASLCC EDRSDLLPDL IKSLKALRLR TLKAEITTLG GRVKNVLFIT GEEDSSSNSN 300 EQQQQQQLPY SISSIQEALK AVMEKTGGDV SSSGSVKRQR TNINILEQQQ HRSL

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MCGFKEEDQG ECSQTIHNFQ GYQEQLLLQH HQQMQQQQQQ QSNDIYGGAR GSGLIFPEVS  60
PILPWSLPPV HSFNPDHFSS SHPVRDHDQF LIPPPVPSSY GSLFNRRAPA LQFAYDGSSS  120
DHLRIISETL GPVVQPGSAP FGLQAELGKM TAQEIMDAKA LAASKSHSEA ERRRRERINN  180
HLAKLRSLLP STTKTDKASL LAEVIQHVKE LKRQTSLIAE TSPVPTEIDE LTLDTSDEDG  240
KFVIKASLCC EDRSDLLPDL IKSLKALRLR TLKAEITTLG GRVKNVLFIT GEEDSSSNSN  300
EQQQQQQLPY SISSIQEALK AVMEKTGGDV SSSGSVKRQR TNINILEQQQ HRSL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	171	176	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	3e-99	bHLH family protein