PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021659100.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 377aa MW: 41937.9 Da PI: 8.4354

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021659100.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.1	0.0006	139	162	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ Cg+ F +L++H+ H XP_021659100.1 139 FPCTACGEIFQKAQLLEQHQAIkH 162 89******************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MAAGIASVFN KFLSIFILLL HLGCFIFAAK DHQPPTKKRK VSSTSSSSTR LKPHRALSSS 60 WTYLKRIFSS KTYKTSSSQG QSPVPTLTSA RSSQQSIVSM IPPEDQSSDI PPRTKPSGSC 120 QESDISTDDQ FFPLRNDIFP CTACGEIFQK AQLLEQHQAI KHAVSELHDG DSGKNIVHII 180 FKTGWTSKEK NPEIHRILKI HNSPKILSRF EEYREVVKAK AARNSTVKRR DERCIADGNE 240 LLRFYCSTFI CDLGANGNSC ICNQQYCSVC GIIKSGFSPK MDGISTLSSS WRAHVAIPEE 300 VEEEFKFMNV KRAMLVCRVV AGRIGCEMEE EVDKETGGFD SVVGRGGSGI HSRLDEEELL 360 VFNPRAVLPC FVIVYTV

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MAAGIASVFN KFLSIFILLL HLGCFIFAAK DHQPPTKKRK VSSTSSSSTR LKPHRALSSS  60
WTYLKRIFSS KTYKTSSSQG QSPVPTLTSA RSSQQSIVSM IPPEDQSSDI PPRTKPSGSC  120
QESDISTDDQ FFPLRNDIFP CTACGEIFQK AQLLEQHQAI KHAVSELHDG DSGKNIVHII  180
FKTGWTSKEK NPEIHRILKI HNSPKILSRF EEYREVVKAK AARNSTVKRR DERCIADGNE  240
LLRFYCSTFI CDLGANGNSC ICNQQYCSVC GIIKSGFSPK MDGISTLSSS WRAHVAIPEE  300
VEEEFKFMNV KRAMLVCRVV AGRIGCEMEE EVDKETGGFD SVVGRGGSGI HSRLDEEELL  360
VFNPRAVLPC FVIVYTV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G29660.1	1e-124	C2H2 family protein