PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021659092.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 484aa MW: 54356.4 Da PI: 6.9932

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021659092.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.6	1.7e-14	140	186	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+ Ed +l+ +vkq+G + W+ Ia+++ R +kqc++rw+++l XP_021659092.1 140 KGQWTEGEDRKLIMLVKQFGVRKWAQIAKKLD-ARAGKQCRERWHNHL 186 799***************************.***********97 PP
2	Myb_DNA-binding	55.9	9.6e-18	192	234	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +W++eE+ +lv+a+ + G++ W+ Ia+ ++ gRt++++k++w+ XP_021659092.1 192 KESWSEEEERILVEAHSKVGNR-WAEIAKLIP-GRTENSIKNHWN 234 578*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MERGRGGGGG VVGFGIENLS NNPSIYRPTP PLTAVDRFLC GRSYFSQQQT QNNVKSNETH 60 VSTNGFYDFN SSTGAIAGVP WPCFQEINFV DTLFVDEDSL NWTCKRDPNA GLEEEVKVSA 120 RISKGQGKKA KTGSCPTLIK GQWTEGEDRK LIMLVKQFGV RKWAQIAKKL DARAGKQCRE 180 RWHNHLRPDI KKESWSEEEE RILVEAHSKV GNRWAEIAKL IPGRTENSIK NHWNATKRRQ 240 NSRKRNKQTK NQIGKPQSSI LQDYIRSKNL KDPFITNATI ITPSHSTTTT TNTPSSSTTS 300 EDPSSQFNYF LPELSESTVD DSPPLFSQTY DDELLFFQNF FTNNSTEPFV EKVPIKNPVE 360 METSYNADLH LKDSSVLDSL GLYQNNGEQV TDTSDQCGFF ASTLTSPKTR SNGVQAEERP 420 TGHLYSDFYV SHLLNVASTC SSSIGYGYDN IMNTELMMNQ TFSNGKKEMD LIEMVSSSQF 480 SQGT

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MERGRGGGGG VVGFGIENLS NNPSIYRPTP PLTAVDRFLC GRSYFSQQQT QNNVKSNETH  60
VSTNGFYDFN SSTGAIAGVP WPCFQEINFV DTLFVDEDSL NWTCKRDPNA GLEEEVKVSA  120
RISKGQGKKA KTGSCPTLIK GQWTEGEDRK LIMLVKQFGV RKWAQIAKKL DARAGKQCRE  180
RWHNHLRPDI KKESWSEEEE RILVEAHSKV GNRWAEIAKL IPGRTENSIK NHWNATKRRQ  240
NSRKRNKQTK NQIGKPQSSI LQDYIRSKNL KDPFITNATI ITPSHSTTTT TNTPSSSTTS  300
EDPSSQFNYF LPELSESTVD DSPPLFSQTY DDELLFFQNF FTNNSTEPFV EKVPIKNPVE  360
METSYNADLH LKDSSVLDSL GLYQNNGEQV TDTSDQCGFF ASTLTSPKTR SNGVQAEERP  420
TGHLYSDFYV SHLLNVASTC SSSIGYGYDN IMNTELMMNQ TFSNGKKEMD LIEMVSSSQF  480
SQGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58850.1	4e-62	MYB family protein