PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021658982.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 1662aa MW: 183835 Da PI: 5.8104

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021658982.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	1547	1572	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kC C++sF++k +L+ H r+ + XP_021658982.1 1547 HKCDleGCTMSFKTKAELQLHKRNqC 1572 789999****************9877 PP
2	zf-C2H2	12.8	0.00034	1630	1656	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 ykC+ dCg sF+ s++ rH r+ H XP_021658982.1 1630 YKCKveDCGLSFRFVSDFSRHRRKtgH 1656 9**********************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 1662 aa Download sequence
MGNVEIPKWL KDLPLAPEFR PTDTEFADPI AYISKIEKEA SAFGICKIIP PLPKPSKRYV 60 FYNLNKSLSK CPELGDGVDL SNASSSLKTG LADCTNEGEV RAVFTTRHQE LGQGMKRTKG 120 MVKESPQLGV HKQVWQSGEI YTLEQFESKS KAFARSLLGM IKEVNPLVIE ALFWKAASEK 180 PIHVEYANDV PGSGFGEPEG QFRYFHRRRR KRASYKSYRR STESSDFKKN EMDNVNNSCN 240 DEIKGAAFTN DPSTSSGPIP TSSITSSTSI LEDNLRSSKR KSVNATSDME GTAGWKLSNS 300 PWNLQVIARS PGSITRFMPD DIPGVTSPMV YIGMLFSWFA WHVEDHELHS MNFLHTGSPK 360 TWYAVPGDYA FAFEEVICTE AYGGSIDRLG ALTLLGEKTT LLSPEVVVSS SIPCCRLIQN 420 PGDFVVTFPR AYHVGFSHGF NCGEAANFGT PQWLKVAREA AVRRAAMNYL PMLSHQQLLY 480 LLTMSFVSRV PRSLLPGARS SRLRDRLKEE RELSVKKAFI EDILKENGIL SVLLGKDSAY 540 NVVIWNPDLL PCASKESQLP ITIATSSEEN VLHAHSEDKS GTTGNDLFKE MSLYMESLND 600 LYVEDDDLSC DFQVDSGTLA CVACGILGFP FMCVVQPSER ASIELLPVDH PLVQERSRVE 660 KSENCHSSVA CGGSIKCSVP DDLHPVPDLF LPLTDLPMPR GWNNSSKFLR PRIFCLEHAV 720 QIEELLQSKG GANMLIICHS DYQKIKAHAT AISEDIGTPF NYNEVALENA SQEDLNLICL 780 AIDDEDHDEC GEDWTSRMGI NLQCCVKVRK NAPSSKVQHA LALGGLFSDE SPSSKVQHAL 840 ALRGVFSDES SSSDFLNIKW QSRRSRSRTK LNSPAHCKPC DTVETNKDCA LGGRSGRASI 900 EKGEKLIQYT RRKYKVKIDC SASWGQGCPR NHVMEEVSVS DCQDHVKHYG KTSKISPSNV 960 ETSGSDSAGF DFSRLGMSGM LHEVKVLEAT GDMSLNSAPL HVAGSLLTAN VAVEHVGEVE 1020 NQTLEESNGY EILCNVAACG SLGMQRKERV TAGTCQVEDS NAIECSSPCV IAADERSGMQ 1080 GECQIMEKFS LRNETCNMVS EGQHKVLASR DVLANEITGL AAPASLHACT PVGQMENVVV 1140 EKSCMNNEIS DCVTLGNEVQ VDLQTGKGKG SQSILFDDTS INQLASSLEE KAEFSQETCF 1200 SEDKLQHEVQ FTGGINGEEL IPSNVRLVNH PNHVSVDECS EISREPCAAV KFCNGATSEN 1260 GVLQAIQTTN ERKAEHILCS VTQMEVEQPT TASVEGFSEV IGGSTAKEDL CTISSSDSEM 1320 LLKVPIANRS KVEELVPNPP TQMQDPFVPV AVEEYSEAPR EKCTAEDNND VNLDTEVQQE 1380 IHLDDGVTRD DEAPEIRETI IASNEEEPLS SQVTQIYQPN PEPFKKCSGT DEEFCTIENM 1440 LKGQEDCSSY ELESNKSTVV DPGSTAGKSR KRKNEVDQLT DNKLNCNGFI KSPCEGLRPR 1500 AGKDATCSNE MNIRKSTQDN PPRKKARKPS DISVPCTKKK EIMKRSHKCD LEGCTMSFKT 1560 KAELQLHKRN QCPYEGCRKK FSTHKYAIIH QRVHEGDRPL KCPWKGCSMS FKWAWARTEH 1620 IRVHTGEKPY KCKVEDCGLS FRFVSDFSRH RRKTGHYVNT PA

Sequence ? help Back to Top

Protein Sequence Length: 1662 aa Download sequence

MGNVEIPKWL KDLPLAPEFR PTDTEFADPI AYISKIEKEA SAFGICKIIP PLPKPSKRYV  60
FYNLNKSLSK CPELGDGVDL SNASSSLKTG LADCTNEGEV RAVFTTRHQE LGQGMKRTKG  120
MVKESPQLGV HKQVWQSGEI YTLEQFESKS KAFARSLLGM IKEVNPLVIE ALFWKAASEK  180
PIHVEYANDV PGSGFGEPEG QFRYFHRRRR KRASYKSYRR STESSDFKKN EMDNVNNSCN  240
DEIKGAAFTN DPSTSSGPIP TSSITSSTSI LEDNLRSSKR KSVNATSDME GTAGWKLSNS  300
PWNLQVIARS PGSITRFMPD DIPGVTSPMV YIGMLFSWFA WHVEDHELHS MNFLHTGSPK  360
TWYAVPGDYA FAFEEVICTE AYGGSIDRLG ALTLLGEKTT LLSPEVVVSS SIPCCRLIQN  420
PGDFVVTFPR AYHVGFSHGF NCGEAANFGT PQWLKVAREA AVRRAAMNYL PMLSHQQLLY  480
LLTMSFVSRV PRSLLPGARS SRLRDRLKEE RELSVKKAFI EDILKENGIL SVLLGKDSAY  540
NVVIWNPDLL PCASKESQLP ITIATSSEEN VLHAHSEDKS GTTGNDLFKE MSLYMESLND  600
LYVEDDDLSC DFQVDSGTLA CVACGILGFP FMCVVQPSER ASIELLPVDH PLVQERSRVE  660
KSENCHSSVA CGGSIKCSVP DDLHPVPDLF LPLTDLPMPR GWNNSSKFLR PRIFCLEHAV  720
QIEELLQSKG GANMLIICHS DYQKIKAHAT AISEDIGTPF NYNEVALENA SQEDLNLICL  780
AIDDEDHDEC GEDWTSRMGI NLQCCVKVRK NAPSSKVQHA LALGGLFSDE SPSSKVQHAL  840
ALRGVFSDES SSSDFLNIKW QSRRSRSRTK LNSPAHCKPC DTVETNKDCA LGGRSGRASI  900
EKGEKLIQYT RRKYKVKIDC SASWGQGCPR NHVMEEVSVS DCQDHVKHYG KTSKISPSNV  960
ETSGSDSAGF DFSRLGMSGM LHEVKVLEAT GDMSLNSAPL HVAGSLLTAN VAVEHVGEVE  1020
NQTLEESNGY EILCNVAACG SLGMQRKERV TAGTCQVEDS NAIECSSPCV IAADERSGMQ  1080
GECQIMEKFS LRNETCNMVS EGQHKVLASR DVLANEITGL AAPASLHACT PVGQMENVVV  1140
EKSCMNNEIS DCVTLGNEVQ VDLQTGKGKG SQSILFDDTS INQLASSLEE KAEFSQETCF  1200
SEDKLQHEVQ FTGGINGEEL IPSNVRLVNH PNHVSVDECS EISREPCAAV KFCNGATSEN  1260
GVLQAIQTTN ERKAEHILCS VTQMEVEQPT TASVEGFSEV IGGSTAKEDL CTISSSDSEM  1320
LLKVPIANRS KVEELVPNPP TQMQDPFVPV AVEEYSEAPR EKCTAEDNND VNLDTEVQQE  1380
IHLDDGVTRD DEAPEIRETI IASNEEEPLS SQVTQIYQPN PEPFKKCSGT DEEFCTIENM  1440
LKGQEDCSSY ELESNKSTVV DPGSTAGKSR KRKNEVDQLT DNKLNCNGFI KSPCEGLRPR  1500
AGKDATCSNE MNIRKSTQDN PPRKKARKPS DISVPCTKKK EIMKRSHKCD LEGCTMSFKT  1560
KAELQLHKRN QCPYEGCRKK FSTHKYAIIH QRVHEGDRPL KCPWKGCSMS FKWAWARTEH  1620
IRVHTGEKPY KCKVEDCGLS FRFVSDFSRH RRKTGHYVNT PA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	0.0	C2H2 family protein