PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021658410.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 158aa MW: 18074.2 Da PI: 10.3689 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.3 | 8.4e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+ks rqvtfskRrng++KKA EL vLCd+++ vi+fs++gklye++s XP_021658410.1 9 KRIEDKSSRQVTFSKRRNGLIKKARELTVLCDVQIGVIVFSNSGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 51.2 | 5.5e-18 | 60 | 125 | 34 | 99 |
K-box 34 eqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + R+l G e+Ls+ +L +Le+q +l++iR+kK+el+l+ i+ l +ke +l+e+n L++++e XP_021658410.1 60 TGRQLEGPTCEQLSVTDLIKLENQFAAALTQIRAKKTELMLDFIKALHNKEIMLKEDNVHLEREME 125 569***********************************************************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 158 aa Download sequence |
MGRKKVEMKR IEDKSSRQVT FSKRRNGLIK KARELTVLCD VQIGVIVFSN SGKLYEFCST 60 GRQLEGPTCE QLSVTDLIKL ENQFAAALTQ IRAKKTELML DFIKALHNKE IMLKEDNVHL 120 EREMEAMKNG VGMVKRLRTH PNLHLVHSPQ QATLSLLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G65050.2 | 1e-33 | MIKC_MADS family protein |