PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021657833.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 109aa MW: 12327.2 Da PI: 10.4315 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.2 | 2.1e-28 | 53 | 103 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+ks rqvtfskR+ g++KKA ELSvLCd+e+a+iifs gklye+ss XP_021657833.1 53 KRIEDKSSRQVTFSKRKGGLMKKARELSVLCDVEIAMIIFSGGGKLYEFSS 103 79***********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 109 aa Download sequence |
MPKPTNMNRR SDGQEGDKKV ESQYTRQLNI ESLKRCFFWL IGGEMGRGKV QLKRIEDKSS 60 RQVTFSKRKG GLMKKARELS VLCDVEIAMI IFSGGGKLYE FSSGDSSTL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 31 | 36 | ESLKRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61120.1 | 3e-27 | MIKC_MADS family protein |