PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021657582.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

DBB

Protein Properties

Length: 385aa MW: 43078.3 Da PI: 4.5362

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021657582.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	16.1	2.4e-05	2	35	3	36
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg 36 e++C+ + + +Ce + +lC +C + H+ XP_021657582.1 2 EKICEFCTALRPVVYCEADAAYLCLSCDAKVHSA 35 689****99****************99954 PP
2	zf-B_box	16.7	1.6e-05	47	85	5	40
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg....Htvv 40 C+ + + ++ C d ++C+ C ++H g H+ + XP_021657582.1 47 LCDSCRNRPAYARCLDHWIFVCRVCDWSIH-GvssqHQKR 85 7*****************************.667778765 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MEKICEFCTA LRPVVYCEAD AAYLCLSCDA KVHSANALSN RHLRTLLCDS CRNRPAYARC 60 LDHWIFVCRV CDWSIHGVSS QHQKRSVCSY MGCPSAKDFA ALWGFELDEL DKSAIRDQLI 120 SAPSDSVQPS VAVFSIPRES CQQIGSSSRT SKVNYSTLAS GTQSEVGLSS KQAEKSGKGQ 180 QPQNNGFILQ QILDLKRLQL TEMDNSSLVI CGREDVDVSS SIFETLEKLD DSVDQHSQDP 240 GNSSYPLQDL KVDSLPLSFS QPGPLPLPST VANPVLGESF WQCKSPVQSS QLWSQNMQDL 300 GVCEDIVSHD DFNIPDVDIT FRNFEELFGT EQDPIRALLD DEDKPCYTVQ EMSSLDTSHN 360 RNARTKEVIF MPTFPEFQLR ELERY

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MEKICEFCTA LRPVVYCEAD AAYLCLSCDA KVHSANALSN RHLRTLLCDS CRNRPAYARC  60
LDHWIFVCRV CDWSIHGVSS QHQKRSVCSY MGCPSAKDFA ALWGFELDEL DKSAIRDQLI  120
SAPSDSVQPS VAVFSIPRES CQQIGSSSRT SKVNYSTLAS GTQSEVGLSS KQAEKSGKGQ  180
QPQNNGFILQ QILDLKRLQL TEMDNSSLVI CGREDVDVSS SIFETLEKLD DSVDQHSQDP  240
GNSSYPLQDL KVDSLPLSFS QPGPLPLPST VANPVLGESF WQCKSPVQSS QLWSQNMQDL  300
GVCEDIVSHD DFNIPDVDIT FRNFEELFGT EQDPIRALLD DEDKPCYTVQ EMSSLDTSHN  360
RNARTKEVIF MPTFPEFQLR ELERY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	1e-31	CO-like family protein