PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021657062.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | YABBY | ||||||||
Protein Properties | Length: 227aa MW: 25457.8 Da PI: 9.0366 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 165.1 | 5.2e-51 | 61 | 212 | 6 | 170 |
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100 +se vCyv+CnfCnt lav+vP + f+ vtv+CGhC++lls+ + +l+ + h l++ ++++ ++ e ++s s+s++++ XP_021657062.1 61 ASECVCYVHCNFCNTNLAVNVPGNITFNAVTVKCGHCSNLLSLY----TGALPQNTH--------HLQNVHKQNIFYQYLSEDSRS-SKSNEVSA 142 7899**************************************54....344555544........334443333333333333333.33333334 PP YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++++++e p++ v krqr+Psayn+fikeei+r+ka+nP+ish+eafs+aaknWa++P+ fgl XP_021657062.1 143 SDSSSENEHPKTLSVHAAKGKRQRAPSAYNKFIKEEIRRLKANNPNISHKEAFSTAAKNWAYLPHTQFGL 212 46677788999999999***************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MARLYCLLFI YLHKIIHFTQ DSNLSPFSSS IIKLSFNFQD SLLSLVIDLQ FTSRMSLNNI 60 ASECVCYVHC NFCNTNLAVN VPGNITFNAV TVKCGHCSNL LSLYTGALPQ NTHHLQNVHK 120 QNIFYQYLSE DSRSSKSNEV SASDSSSENE HPKTLSVHAA KGKRQRAPSA YNKFIKEEIR 180 RLKANNPNIS HKEAFSTAAK NWAYLPHTQF GLTLNGNVKD IQGQGTL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 161 | 166 | KGKRQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 6e-46 | YABBY family protein |