PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021656742.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 469aa MW: 52196.4 Da PI: 8.1769

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021656742.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.5	2.4e-05	126	148	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+Cg+s++++++ H ++ XP_021656742.1 126 FECPICGQSYKSQEEVSMHVESC 148 89*****************8876 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MDDMKGKFKG LMKKVNTQLS SSSSGKFKGH GRVLGGASSS SSGPTNPIHA RYSQPINQKP 60 TPTTSSLNSS SNSKPLPQKT PKFDQNKPDP LNNSTPNRKP ADEFYPFDSL ITSGKRSQNG 120 YSLNVFECPI CGQSYKSQEE VSMHVESCAN KNNNKGSVDE GNVTGESSSG ELQASVGMYL 180 SGKPPAGSVE VALRLFRNVV REPDNAKFRK IRMGNPKIRE AISEVTGGVE LLECIGFELK 240 EEGGEIWAVM EVPNEERMRL INEVIGLLEP RKVEEEMQKV EVAPAGTEEQ VEPKKIDRQI 300 RVFFSVPENV AAKIELPDSF YNLSLEELKR EADARKKKIA ESQLLIPKSY KEKQAKAARK 360 RYRRTLIRFQ FPDGVVLQAV FAPWEPTSAL YKFVSTSLKD PNLEFELLDP VMVKRRVIPH 420 FPAAGERIST LEDEDLVPSA LIKFRPIETE SSVFTGLCNE LLEISEPLN

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MDDMKGKFKG LMKKVNTQLS SSSSGKFKGH GRVLGGASSS SSGPTNPIHA RYSQPINQKP  60
TPTTSSLNSS SNSKPLPQKT PKFDQNKPDP LNNSTPNRKP ADEFYPFDSL ITSGKRSQNG  120
YSLNVFECPI CGQSYKSQEE VSMHVESCAN KNNNKGSVDE GNVTGESSSG ELQASVGMYL  180
SGKPPAGSVE VALRLFRNVV REPDNAKFRK IRMGNPKIRE AISEVTGGVE LLECIGFELK  240
EEGGEIWAVM EVPNEERMRL INEVIGLLEP RKVEEEMQKV EVAPAGTEEQ VEPKKIDRQI  300
RVFFSVPENV AAKIELPDSF YNLSLEELKR EADARKKKIA ESQLLIPKSY KEKQAKAARK  360
RYRRTLIRFQ FPDGVVLQAV FAPWEPTSAL YKFVSTSLKD PNLEFELLDP VMVKRRVIPH  420
FPAAGERIST LEDEDLVPSA LIKFRPIETE SSVFTGLCNE LLEISEPLN