PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021656592.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 362aa MW: 40533.5 Da PI: 6.0466

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021656592.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60	5.1e-19	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++ +G g+W++ ++ g++R++k+c++rw +yl XP_021656592.1 16 KGPWTPEEDKKLIDYIQNHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 63 79********************************************97 PP
2	Myb_DNA-binding	56	9.4e-18	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+++++++++ lG++ W++Ia+ ++ gRt++++k++w+++l XP_021656592.1 69 RGKFSEEEEQIIINLHAVLGNK-WSAIAQNLP-GRTDNEIKNFWNTHL 114 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MMGKSSPFED ENGLKKGPWT PEEDKKLIDY IQNHGHGSWR ALPKLAGLNR CGKSCRLRWT 60 NYLRPDIKRG KFSEEEEQII INLHAVLGNK WSAIAQNLPG RTDNEIKNFW NTHLKKKLLQ 120 MGIDPVTHRP RTDLNLLSNL PQLLAAANFN NLMNNIPWDN GLRPLQNNST DPTHLAKLQL 180 LNNIILQVLS SSPFPNMEAA ATNLLGSSTI YEYLRMNSQL EGLLSSSGQA SGYSLSPQDI 240 TRFLPNFPNL EAHQPPLSDE YHPLKDSKIG SNNNGQLVCD SYGASTSNPL LPPLVSASPD 300 DHCPTMNRKE SCSRMNPNDI SNPSSTSTTF EAWGDLMDDE ASDIYWREII DQASSQPWPM 360 SE

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MMGKSSPFED ENGLKKGPWT PEEDKKLIDY IQNHGHGSWR ALPKLAGLNR CGKSCRLRWT  60
NYLRPDIKRG KFSEEEEQII INLHAVLGNK WSAIAQNLPG RTDNEIKNFW NTHLKKKLLQ  120
MGIDPVTHRP RTDLNLLSNL PQLLAAANFN NLMNNIPWDN GLRPLQNNST DPTHLAKLQL  180
LNNIILQVLS SSPFPNMEAA ATNLLGSSTI YEYLRMNSQL EGLLSSSGQA SGYSLSPQDI  240
TRFLPNFPNL EAHQPPLSDE YHPLKDSKIG SNNNGQLVCD SYGASTSNPL LPPLVSASPD  300
DHCPTMNRKE SCSRMNPNDI SNPSSTSTTF EAWGDLMDDE ASDIYWREII DQASSQPWPM  360
SE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	7e-92	MYB family protein