PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021656309.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Nin-like

Protein Properties

Length: 863aa MW: 97646.2 Da PI: 5.6746

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021656309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.1	1.7e-28	562	612	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+i+l+ l++yF++++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++ XP_021656309.1 562 EKTITLQILRQYFAGSLKDAAKSIGVCPTTLKRICRQHGINRWPSRKIKKV 612 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 863 aa Download sequence
MDHGASALNS TFWTFSSTTS LETANRAYFL EPEPFMSSVL YDPSQYSPFR VETATSLVQS 60 ESFPLEGGKS GSRWLIDPSH SVKHRLMLAV QYLKEYVEDS EVLIQIWMPT KIGGQNVLST 120 IDQPYSLNPN CRSLASYRNV SKTFHLTVEE NSKESAGLPG RVFLGKLPEW TPDVRFFRSD 180 ECPRKSYAKM YNISGCLALP VFEQDNGICL AVVEIVTTTQ KINYNLELEI VGKALEAVDL 240 KSSQDFFPLG VKACNEFYQI SVPEIPEILQ FVCKTHGLPL AVTWALCDWQ GEAEHWQFSE 300 KYDYCISTVD SACYVADSDL LGFHEACSEQ YLFLDQGIVG KAFTTNKQWF ATDITSFSKA 360 NYPLSHHARM FNLRAALAIP LRSIYTGLIE FVLELFFPRD CNDIKEQKQF WDMLSIIIQQ 420 TCKSFHVIMD KELDDKVSEQ MEPSDGRQNK EKIRNLVSSP SNESQEESSW TPHERDTQKK 480 DSFAFISWDC TKEEPEDEFN VITHWENNGT DLYQEQVFSD LGQVEQSSML KPGVERAEDF 540 SVGQRCSLSS KRAGEKRQTK IEKTITLQIL RQYFAGSLKD AAKSIGVCPT TLKRICRQHG 600 INRWPSRKIK KVNHSLRKLQ LVVNSIHGAE GLIQMDSFCK GFQELSSPNF FGKDPFSSSK 660 ICENSKRLKP QPEGGLLSPR GTDSKSQSSS SSQNSGSAIY CSNEEKQLTT NNGLNTGSSL 720 AIEDPVLELR RTYSKAELHS LNQEEPKILR PLPKAPGHSL RDGVVFRVKA TYGEENVRFG 780 FLPNWGFKDL QQEIAKRFKI DDFSRIDLKY LDIDHEPVLL TCDADLEECI DLLSFSQCST 840 IKISLHEVSQ SNLGSSFSSR GPF

Sequence ? help Back to Top

Protein Sequence Length: 863 aa Download sequence

MDHGASALNS TFWTFSSTTS LETANRAYFL EPEPFMSSVL YDPSQYSPFR VETATSLVQS  60
ESFPLEGGKS GSRWLIDPSH SVKHRLMLAV QYLKEYVEDS EVLIQIWMPT KIGGQNVLST  120
IDQPYSLNPN CRSLASYRNV SKTFHLTVEE NSKESAGLPG RVFLGKLPEW TPDVRFFRSD  180
ECPRKSYAKM YNISGCLALP VFEQDNGICL AVVEIVTTTQ KINYNLELEI VGKALEAVDL  240
KSSQDFFPLG VKACNEFYQI SVPEIPEILQ FVCKTHGLPL AVTWALCDWQ GEAEHWQFSE  300
KYDYCISTVD SACYVADSDL LGFHEACSEQ YLFLDQGIVG KAFTTNKQWF ATDITSFSKA  360
NYPLSHHARM FNLRAALAIP LRSIYTGLIE FVLELFFPRD CNDIKEQKQF WDMLSIIIQQ  420
TCKSFHVIMD KELDDKVSEQ MEPSDGRQNK EKIRNLVSSP SNESQEESSW TPHERDTQKK  480
DSFAFISWDC TKEEPEDEFN VITHWENNGT DLYQEQVFSD LGQVEQSSML KPGVERAEDF  540
SVGQRCSLSS KRAGEKRQTK IEKTITLQIL RQYFAGSLKD AAKSIGVCPT TLKRICRQHG  600
INRWPSRKIK KVNHSLRKLQ LVVNSIHGAE GLIQMDSFCK GFQELSSPNF FGKDPFSSSK  660
ICENSKRLKP QPEGGLLSPR GTDSKSQSSS SSQNSGSAIY CSNEEKQLTT NNGLNTGSSL  720
AIEDPVLELR RTYSKAELHS LNQEEPKILR PLPKAPGHSL RDGVVFRVKA TYGEENVRFG  780
FLPNWGFKDL QQEIAKRFKI DDFSRIDLKY LDIDHEPVLL TCDADLEECI DLLSFSQCST  840
IKISLHEVSQ SNLGSSFSSR GPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein