PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021655892.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | HB-other | ||||||||
Protein Properties | Length: 1752aa MW: 196919 Da PI: 5.4276 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.3 | 1.3e-18 | 29 | 85 | 1 | 57 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r kR+ t+ qle+Le++++ + yps+++r++L++klgL++rq ++WF+ rR k+kk XP_021655892.1 29 RPKRQMKTPFQLEALEKAYALEAYPSEAMRADLSQKLGLSDRQLQMWFCHRRLKDKK 85 579****************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1752 aa Download sequence |
MESNSEGENQ NRGSSANNNI GNSNEGHSRP KRQMKTPFQL EALEKAYALE AYPSEAMRAD 60 LSQKLGLSDR QLQMWFCHRR LKDKKETPAK KPRKAVPLES PVEEMRAMAP EPEPEPGSDY 120 GSGSGSGSSP FMEPRKVSLD DMPMIRRYYE SSPQSVMELR AIACVEAQLG EPLREDGPIL 180 GMEFDPLPPD AFGAPIAMAE QQKRPMHSYA GEVYERHDAK SSKVSARAFH EYQFLQDQSS 240 IRSDAYGQVD QSPYRDPSVD IPRGKASIIH EDEPLAKVQG VRHLSQPDKK GHALSSLHRD 300 DDYLLHHESV TNNRIGAHST VHQIMGSQNP DIFPDAQIFH TDTDLRIGKK CKNDEARITR 360 EVEARENQIR KELEKQDQLR RKSEERMRKE MEKQERERRK EEDRLIRERQ REEERSLREQ 420 KRELERREKF LQKEYLRAEK KRQKEELRRE KEAVKRQAAI EKATARRIAK ESLDLIEDEQ 480 LELMELAAAS KGLTSVVHLN YDTLQNLDSF RDSLSIFPPE SIQLKKPFAI QPWMDSEENI 540 GNLLMVWKFF ITFADVLGLW PFTLDEFVQA FHDYDSRLLG EVHLALLKLI IKDIEDVART 600 PSTGLGANQY CAANPEGGHL QIVEGAYIWG FDIRNWQRHL NPLTWPEIFR QLALSAGFGP 660 RLKKRSSTRT YLGDNDEVKG CEDTISTLRN GSAAENAFSL MRERGLLLPR RSRHRLTPGT 720 VKFAAFHVLS LEGSKGLTVL ELADKIQKSG LRDLTTSKTP EASISVALTR DQKLFERIAP 780 STYCLRAAYR KDPADAEAIL SAARKKIRIF ENGFSGGEDV DDVERDEDSE GDIDEDPEVD 840 DLTTPLSANR SADHSIEANT CSGSGKDNLC NGIPLIAQNE LVKEPSSIHL NGPKDAKTPS 900 STEQCVPHED VGVRNVDQEN IEIDESKSGE SWIQGLAEGE YAHLSVEERL NSLVALVGIA 960 NEGNTIRAVL EDRLEAANAL KKQMWAEAQL DRSRLKEDIV SKLDFPSFIG GKAEIQVTSS 1020 VVEGGQSPLP LDDSKNKEAS PSTAVDQKPL PASRNVQNHH NSVPTEKTLM VQDLSVNPDN 1080 FSSQQHGYAS KRSRSQLKAY IGHIAEETYV YRSLPLGQDR RHNRYWQFVA SASKNDPCSG 1140 RIFVELHDGN WRLIDSEEAF DALLSSLDTR GIRESHLRIM LQKIEKSFKQ NVRRNFQSEN 1200 IVCQNGIAAE NEVGEADSSP NCSAGIGSPS SMVCGSSSDA LDTSSLFRIE LGRNEMEQKG 1260 AMKRYQDFQK WTWKECFNSL TLCAMKYGKK RCSQLLTTCD VCFDSYLAED SDSVSCHQTL 1320 NAADKSFNFL EHGIQCKVKR KLDPGVCDTS LPLGIRLLKA LLAFIEASVP PEARESFWIE 1380 NHRKTWATKL NMSSSTEELL QILTVLESAI KRDYLSANFE MTKELLGSAT SAQSALYGST 1440 DLGSVPVLPW IPKTTAAVAL RLFELDGSVA YIQHEKAELS EDKPVKVYMK LPSRYSPLKN 1500 KEIELKGLRQ HEHVKEEHLT DLRSKRSSYK RGRGGRDQGY ATKWQRRVPG LKSYSNRRNV 1560 RETGKFNLGS KQGRRTNAKS SGRGLRTVRR RRVEMMVAEE PLIGRMTSTV GPRSYGGSLR 1620 NLGEENWGAE KVRTDADVGM DVDVDVDVDV DLDDADNNSV EAGESDDNVE AEGYEQRNWE 1680 QSFNGASNRW NRTVMEVSDD DGDASGDDNG IEEMGAEESE GDIEISEGSD GVGNKIENEE 1740 GTDSAVSDFS SD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 79 | 86 | RRLKDKKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28420.1 | 0.0 | HB-other family protein |