PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021655776.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 1645aa MW: 182109 Da PI: 6.1804

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021655776.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.7	0.00018	1530	1555	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ykC C++sF +k +L+ H r+ + XP_021655776.1 1530 YKCDleGCTMSFETKAELQLHKRNrC 1555 99********************9877 PP
2	zf-C2H2	11.3	0.0011	1613	1639	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 ykC+ Cg sF+ s++ rH r+ H XP_021655776.1 1613 YKCKveGCGLSFRFVSDFSRHRRKtgH 1639 99*********************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 1645 aa Download sequence
MGNVEIPKWL KDLPLAPEFR PTDTEFADPI AYISKIEKEA SFFGICKIVP PVPKPSRRYV 60 FCNLNKSLSK CPELGDGVDL SNVSSSLKTG FADCGNEEEV RAVFTTRHQE LGQGTKRTKG 120 MVKESPQLGV HKQVWQSGEI YTLEQFESKS KAFARSLLGM IKEVNPLVIE ALFWKAASEK 180 PIYVEYANDV PGSGFGEPEG QFRYFHRQRR KRASYKSYRR SAASSDCKKN ETDNVNSSCN 240 DEVKGDAFKN DPSTSSGPTP RSSITFSTSI LEENLGSSKQ KIVNAGSDME GTAGWKLSNS 300 PWNLQVIARS PGSITRFMPD DIPGVTSPMI YIGMLFSWFA WHVEDHELHS MNFLHTGSPK 360 TWYAVPGDYA LAFEEIIGTE AYGGSIDRLG VLTLLGEKTT LLSPEVVVSS NIPCCRLIQN 420 PGEFVVTFPR AYHVGFSHGF NCGEAANFGT PQWLKVAKEA AVRRAAMNYL PMLSHQQLLY 480 LLTMSFVSRV PRSLLPGARS SRLRDRLKEE RELSVKKAFI EDMLKENSIL SALIGKDSTY 540 NVVIWNPDLL PCASKESQLP STISITSEEN VSHAYSEDKS SATGNDLFKE MTLYMETLND 600 LYMDDDDLSC DFQVDSGTLA CVACGILGFP FMCVVQPSER ASIELLPVDH PLVQEGSNAE 660 KYKNYHSFAA CDGSIRGSVP DDLHPVPDLS LPLKDLQMPG GWNNSSKFLR PRIFCLEHGV 720 QIEELLQSKG GANMLIICHS DYQKIKTHAA AISEDISIRF NYNEVPLESA SQEDLNLIYL 780 AIDDEDHDEC GEDWTSKMGI NLRYCVKVRK NAPSRKVQHA LALGGLFSDV SSSSDFLNIK 840 WQSRRSRSRT KLTRPAYCKP HDNVERKKDD ALGKISGGVN IEKGEKLIQY TRRKYKVKID 900 CSTSWGQGCP RNHMEEEASV ANCEDLMKHT GKTSKISPCN VETSGSDSAG FDFSPIGMSG 960 VLHEVQVLEA TDNMSLNSAP LHVAGSLLTA SVAVEQVVRD VECQILEESK GYEIGCNVAA 1020 CGSSEMQHEE KVTGGTSEVE DSNAIECSIP FVIAADERFG IQGEYQIMEK IINLRHETCS 1080 MVSKGQHKDL TGKDVLTNEV SDLSISVSLH ASCLPAGQME SIVAKKSCMN NEVTGRMTLG 1140 DELQLKLPTT GKSDCSQSIS YDDKLKNQHS TLVEERAGFP QENCFAEDKL QNEVAITGGS 1200 KGEELISGNI RLVNCVSVGG SSEILREPCA AVDLCNGVTS ENRGQQAIQT TNERKVEHIS 1260 CPLTQMDIDQ PTTSSLEGYH EVIGGISAKG DLFTGSVSDS EILLEISTAN RSNVEEVIPN 1320 SPAQMQDPIV PCSVGEYSEA PREKCIAEDL SIGVNLYTDL QQQIHSDDWV TRDDEGHKIC 1380 QTTSATNEEP LSSQVTQINQ PNPDPFKKCS GTDEESCTIE NIMLKGQEVC SSCELESTKS 1440 TVVGPRSTAG KGRKRKNEVE QLTDKTLNCS GFIKSPCEGL RPRAGKDATC RNGIDNRKST 1500 QENPLRKKAR KPSDVSVPCT KKKETAKRSY KCDLEGCTMS FETKAELQLH KRNRCPYEGC 1560 RKRFSSHKYA IIHQRVHEDD RPLKCPWKGC SMSFKWAWAR TEHIRVHTGE KPYKCKVEGC 1620 GLSFRFVSDF SRHRRKTGHY VNTPG

Sequence ? help Back to Top

Protein Sequence Length: 1645 aa Download sequence

MGNVEIPKWL KDLPLAPEFR PTDTEFADPI AYISKIEKEA SFFGICKIVP PVPKPSRRYV  60
FCNLNKSLSK CPELGDGVDL SNVSSSLKTG FADCGNEEEV RAVFTTRHQE LGQGTKRTKG  120
MVKESPQLGV HKQVWQSGEI YTLEQFESKS KAFARSLLGM IKEVNPLVIE ALFWKAASEK  180
PIYVEYANDV PGSGFGEPEG QFRYFHRQRR KRASYKSYRR SAASSDCKKN ETDNVNSSCN  240
DEVKGDAFKN DPSTSSGPTP RSSITFSTSI LEENLGSSKQ KIVNAGSDME GTAGWKLSNS  300
PWNLQVIARS PGSITRFMPD DIPGVTSPMI YIGMLFSWFA WHVEDHELHS MNFLHTGSPK  360
TWYAVPGDYA LAFEEIIGTE AYGGSIDRLG VLTLLGEKTT LLSPEVVVSS NIPCCRLIQN  420
PGEFVVTFPR AYHVGFSHGF NCGEAANFGT PQWLKVAKEA AVRRAAMNYL PMLSHQQLLY  480
LLTMSFVSRV PRSLLPGARS SRLRDRLKEE RELSVKKAFI EDMLKENSIL SALIGKDSTY  540
NVVIWNPDLL PCASKESQLP STISITSEEN VSHAYSEDKS SATGNDLFKE MTLYMETLND  600
LYMDDDDLSC DFQVDSGTLA CVACGILGFP FMCVVQPSER ASIELLPVDH PLVQEGSNAE  660
KYKNYHSFAA CDGSIRGSVP DDLHPVPDLS LPLKDLQMPG GWNNSSKFLR PRIFCLEHGV  720
QIEELLQSKG GANMLIICHS DYQKIKTHAA AISEDISIRF NYNEVPLESA SQEDLNLIYL  780
AIDDEDHDEC GEDWTSKMGI NLRYCVKVRK NAPSRKVQHA LALGGLFSDV SSSSDFLNIK  840
WQSRRSRSRT KLTRPAYCKP HDNVERKKDD ALGKISGGVN IEKGEKLIQY TRRKYKVKID  900
CSTSWGQGCP RNHMEEEASV ANCEDLMKHT GKTSKISPCN VETSGSDSAG FDFSPIGMSG  960
VLHEVQVLEA TDNMSLNSAP LHVAGSLLTA SVAVEQVVRD VECQILEESK GYEIGCNVAA  1020
CGSSEMQHEE KVTGGTSEVE DSNAIECSIP FVIAADERFG IQGEYQIMEK IINLRHETCS  1080
MVSKGQHKDL TGKDVLTNEV SDLSISVSLH ASCLPAGQME SIVAKKSCMN NEVTGRMTLG  1140
DELQLKLPTT GKSDCSQSIS YDDKLKNQHS TLVEERAGFP QENCFAEDKL QNEVAITGGS  1200
KGEELISGNI RLVNCVSVGG SSEILREPCA AVDLCNGVTS ENRGQQAIQT TNERKVEHIS  1260
CPLTQMDIDQ PTTSSLEGYH EVIGGISAKG DLFTGSVSDS EILLEISTAN RSNVEEVIPN  1320
SPAQMQDPIV PCSVGEYSEA PREKCIAEDL SIGVNLYTDL QQQIHSDDWV TRDDEGHKIC  1380
QTTSATNEEP LSSQVTQINQ PNPDPFKKCS GTDEESCTIE NIMLKGQEVC SSCELESTKS  1440
TVVGPRSTAG KGRKRKNEVE QLTDKTLNCS GFIKSPCEGL RPRAGKDATC RNGIDNRKST  1500
QENPLRKKAR KPSDVSVPCT KKKETAKRSY KCDLEGCTMS FETKAELQLH KRNRCPYEGC  1560
RKRFSSHKYA IIHQRVHEDD RPLKCPWKGC SMSFKWAWAR TEHIRVHTGE KPYKCKVEGC  1620
GLSFRFVSDF SRHRRKTGHY VNTPG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	0.0	C2H2 family protein