PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021655431.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family AP2
Protein Properties Length: 555aa    MW: 60129 Da    PI: 7.3237
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021655431.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.93.3e-15171230155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV++++++gr++A+++d  +   g  ++ ++++lg ++ +e+Aa+a++ a++k++g
  XP_021655431.1 171 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 230
                     57*******************666664477446*************************98 PP
2AP247.93.2e-15273324155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  XP_021655431.1 273 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 324
                     78****************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 555 aa     Download sequence    
MNVDSSQTQN WLGFSLSSHH HMNMSIPSSD TSQLCFFEAF NSTTAPVSVV DRAQEEDATA  60
GNTVTDLSIF TRTGPKLEDF LGCSTTAPPP QPPQPPPLPQ AICQFHTETP VTTASDTSEI  120
YDSELKTIAA SFLRGFSSTT DQTDTTQKQT PLAQTESAPR KTVDTFGQRT SIYRGVTRHR  180
WTGRYEAHLW DNSCRREGQS RKGRQVYLGG YDKEEKAARA YDLAALKYWG PTTTTNFPIS  240
NYQKELEEMK HMTRQEFVAS LRRKSSGFSR GASVYRGVTR HHQHGRWQAR IGRVAGNKDL  300
YLGTFSTQEE AAEAYDIAAI KFRGLNAVTN FDMSRYDVKS IANSNLPIGG ISNKSKNSLD  360
SASDSKSIDG CRSADDRDLS SASSVTFASQ PPATSALSFA LPIKQDPSDY WSNILGCQRG  420
TSTSSSLNSI GKSTNSNVAQ SVLFQSSTNF PSTTAFSMDF NNGSSTVNES NNNGLLFSGG  480
YLQQQSGGVS GGGGGGISTN SSSSVPFATP VALNISGSSY EGNSSYGSWI AQSLHSFQSA  540
KPNLSMFQTP IFGME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.11e-151AP2 family protein