PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021655029.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 256aa MW: 29239.8 Da PI: 5.9876 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.9 | 2e-12 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W eEd++l + + G +W+++++ g+ R++k+c++rw +yl XP_021655029.1 14 RGPWAIEEDQKLMNFILNNGIQCWRLVPKLAGLLRCGKSCRLRWMNYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.6 | 9.1e-16 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+ E++++++++ +lG++ W++Ia++++ gRt++++k+ w++ XP_021655029.1 67 RGALTEAEEDQIIELHSRLGNR-WSKIAAHFP-GRTDNEIKNQWNT 110 7889******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MGRKPCCEKV GLKRGPWAIE EDQKLMNFIL NNGIQCWRLV PKLAGLLRCG KSCRLRWMNY 60 LRPDLKRGAL TEAEEDQIIE LHSRLGNRWS KIAAHFPGRT DNEIKNQWNT RIKKKLKLLG 120 MDPKNHKPVE KDKDFASEEG SLQPAEPSKE ELKLQDSNPG SKGNNQMEND QVDNCCSSGQ 180 DSNLVQKNAT SSKDLDAAGS ILTPRTDQSE SFSSRIDESI LQEDSYQHWI DNVEDFLLSW 240 DGFSNLEEIF HLDSHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14340.1 | 4e-81 | MYB family protein |