PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021654824.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 312aa    MW: 35422.9 Da    PI: 4.4971
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021654824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.26.6e-1986140256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                      k+++++ +q++ Le+ Fe ++++  e++ +LAk lgL+ rqV +WFqNrRa++k
  XP_021654824.1  86 EKKRRLSVDQVHFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 140
                     677899************************************************9 PP
2HD-ZIP_I/II130.37.5e-4286177192
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                     ekkrrls +qv++LE+sFe e+kLeperK +la++Lglqprqva+WFqnrRAR+ktkqlEkdyeaL+++y++lk++ ++L ke+++L++e++
  XP_021654824.1  86 EKKRRLSVDQVHFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYEALQTSYNSLKADYDTLLKEKDKLKAEVS 177
                     69**************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MAAAGGGSSG SNFSVLLQSQ RSPCATSQPL DAFFFTGSSP SFQGSRSMVS FEDVHQVNGS  60
TRPFFRSFDH EENGDEELDE YFHQREKKRR LSVDQVHFLE KSFEVENKLE PERKIQLAKD  120
LGLQPRQVAI WFQNRRARWK TKQLEKDYEA LQTSYNSLKA DYDTLLKEKD KLKAEVSLVT  180
DKILLREKGN LELSDKDALS QEPKKPIGDS TSEGEVSKVS IGACKQEDIS SAKSDIFDSD  240
SPHYTDGVHS SLLEACDSSY VFEPDQSDLS QDEEDNLSKS LWPPYVFPKL EDADYSEPPA  300
SFEDQSFWCW SY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135143RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.19e-51HD-ZIP family protein