PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021654534.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 458aa MW: 50084.2 Da PI: 9.0942

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021654534.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.3e-05	77	99	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_021654534.1 77 FVCEICNKGFQRDQNLQLHRRGH 99 89*******************88 PP
2	zf-C2H2	12.3	0.00051	153	175	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_021654534.1 153 WKCEKCSKIYAVQSDWKAHSKTC 175 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MFPAAMSNST SLSEDASASS GNRVQDFCCL NPVVSTVSPQ QQQQPKIKKK RSLPGNPDPD 60 AEVIALSPKT LLATNRFVCE ICNKGFQRDQ NLQLHRRGHN LPWKLKQRNS KEIKKRAYVC 120 PEPSCVHHHP SRALGDLTGI KKHYCRKHGE KKWKCEKCSK IYAVQSDWKA HSKTCGTREY 180 RCDCGTLFSR KDSFITHRAF CDALAEESAR LSAHQLVSTN PTAQSLLLQN PQPHPSFFPL 240 TTHHHHHLSL NPWDPPPQNP SNPQNPVHIK PETHHFQLPP LFQEPPPSLP THKGLIASSF 300 QSLSNPAASA SSHHLSATAL LQKAATVGAT QTAGHSHMTQ LDMGELGAVS QAAADSVSQI 360 SHQGSYLGNL AAWQKNDRLT RDFLGLTGDG HAGNGNGNGS GNMANGNGGV NVSMNVREML 420 TYAGGVGSQQ YNQRDHALLK HHGFGFPQPP ASETWGDC

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MFPAAMSNST SLSEDASASS GNRVQDFCCL NPVVSTVSPQ QQQQPKIKKK RSLPGNPDPD  60
AEVIALSPKT LLATNRFVCE ICNKGFQRDQ NLQLHRRGHN LPWKLKQRNS KEIKKRAYVC  120
PEPSCVHHHP SRALGDLTGI KKHYCRKHGE KKWKCEKCSK IYAVQSDWKA HSKTCGTREY  180
RCDCGTLFSR KDSFITHRAF CDALAEESAR LSAHQLVSTN PTAQSLLLQN PQPHPSFFPL  240
TTHHHHHLSL NPWDPPPQNP SNPQNPVHIK PETHHFQLPP LFQEPPPSLP THKGLIASSF  300
QSLSNPAASA SSHHLSATAL LQKAATVGAT QTAGHSHMTQ LDMGELGAVS QAAADSVSQI  360
SHQGSYLGNL AAWQKNDRLT RDFLGLTGDG HAGNGNGNGS GNMANGNGGV NVSMNVREML  420
TYAGGVGSQQ YNQRDHALLK HHGFGFPQPP ASETWGDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02670.1	1e-110	C2H2 family protein