PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021654250.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 565aa MW: 61607.3 Da PI: 4.889

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021654250.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.5	6.5e-18	39	86	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +l+++vk++G g+W+++ ++ g+ R++k+c++rw ++l XP_021654250.1 39 KGPWTSAEDAILIEYVKKHGEGNWNAVQKHSGLSRCGKSCRLRWANHL 86 79******************************************9986 PP
2	Myb_DNA-binding	53.9	4.2e-17	92	135	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE++l++++++++G++ W++ a++++ gRt++++k++w++ XP_021654250.1 92 KGAFTQEEEQLIIELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 135 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 565 aa Download sequence
MSHTTYESDD GVLSKDQAES ALAEEGSCGG SGNGVVLKKG PWTSAEDAIL IEYVKKHGEG 60 NWNAVQKHSG LSRCGKSCRL RWANHLRPNL KKGAFTQEEE QLIIELHAKM GNKWARMAAH 120 LPGRTDNEIK NYWNTRIKRR QRAGLPLYPP EVSLQALQES QRGLNISGIN TGDKGHQDLF 180 QTNSYEIPDV IFDSLKANHS ISSYVPELTD ITASSILMKG LGSSQYGSFM SPTMHCQKRL 240 RESTTLIPGY GCSVKPEFPL FDQFQDNSCD KVAQSFGLSF PFDPDPTNKN AQSFGDNQGS 300 HTFANGNFSA SKPTSGLVKM ELPSLQYPEN DLGSWLTSPP PLLETVDTFI QSPPAGAVES 360 SPRNSGLLDA LLHEAKTLSS AKNHSSEKSS NSSTVTPGEL DESSALNICK AEWEDYGDHL 420 SPLGHTATSL FSECTPISTS GSSLDEPPAT EKFTGCNVKS ELTDQAWSPE REKETTNRLD 480 ITRPDALLAS DWLEQGSGYI KDQVIITDNI VTLLGDDLSS DYKQMSAGAS TSNQGWGLSS 540 CAWNNMPAVC QMSELPSENC YLSNL

Sequence ? help Back to Top

Protein Sequence Length: 565 aa Download sequence

MSHTTYESDD GVLSKDQAES ALAEEGSCGG SGNGVVLKKG PWTSAEDAIL IEYVKKHGEG  60
NWNAVQKHSG LSRCGKSCRL RWANHLRPNL KKGAFTQEEE QLIIELHAKM GNKWARMAAH  120
LPGRTDNEIK NYWNTRIKRR QRAGLPLYPP EVSLQALQES QRGLNISGIN TGDKGHQDLF  180
QTNSYEIPDV IFDSLKANHS ISSYVPELTD ITASSILMKG LGSSQYGSFM SPTMHCQKRL  240
RESTTLIPGY GCSVKPEFPL FDQFQDNSCD KVAQSFGLSF PFDPDPTNKN AQSFGDNQGS  300
HTFANGNFSA SKPTSGLVKM ELPSLQYPEN DLGSWLTSPP PLLETVDTFI QSPPAGAVES  360
SPRNSGLLDA LLHEAKTLSS AKNHSSEKSS NSSTVTPGEL DESSALNICK AEWEDYGDHL  420
SPLGHTATSL FSECTPISTS GSSLDEPPAT EKFTGCNVKS ELTDQAWSPE REKETTNRLD  480
ITRPDALLAS DWLEQGSGYI KDQVIITDNI VTLLGDDLSS DYKQMSAGAS TSNQGWGLSS  540
CAWNNMPAVC QMSELPSENC YLSNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	1e-145	MYB family protein