PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021654021.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 222aa MW: 25574.1 Da PI: 9.7193 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 78.7 | 4.1e-25 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n+ rqvtfskRr+g++KKA+EL +LCdae+ + ifss+gklye++s XP_021654021.1 10 RIDNSASRQVTFSKRRKGLIKKAKELAILCDAEIGLAIFSSSGKLYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 79.3 | 9.4e-27 | 82 | 171 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + +++ + +q+e a L+++++nLq+ +R+llGe+L +Ls+k+Lq+Le+qLe sl+ iR kK+++l+++i++l +k + +++en +L kk+ XP_021654021.1 82 NPTSDLKFWQRETAILRQQLHNLQERHRQLLGEQLYDLSVKDLQNLENQLEMSLRGIRMKKEQILTDEIQDLGRKGNLIHQENVELCKKV 171 5678899*******************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MGRGKIVIRR IDNSASRQVT FSKRRKGLIK KAKELAILCD AEIGLAIFSS SGKLYEFASS 60 SSMKSVIERY NKTKEEHQQL LNPTSDLKFW QRETAILRQQ LHNLQERHRQ LLGEQLYDLS 120 VKDLQNLENQ LEMSLRGIRM KKEQILTDEI QDLGRKGNLI HQENVELCKK VCGTRDENAT 180 TQTENSFILY GFNSYESSHI PTHLQLSQPA QPNYETPPKA TK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 1e-100 | MIKC_MADS family protein |