PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653971.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 823aa MW: 95516.8 Da PI: 9.3246

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653971.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.2	2e-21	21	107	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Yn+YA +GFsvrk k ++s +++++++r++vCsk+g++ ++ ++ e++ +r t+tgC ++ + e +++w+vt++ HnHela XP_021653971.1 21 LYNNYALGIGFSVRKGKVRYSAESKNVKQREYVCSKKGFKLDDISS-ENKMVNRLDTQTGCATFIRFTVE-KDVWKVTRFIPTHNHELA 107 6***************************************9999.99999*************9.9*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 823 aa Download sequence
MSNDDNLLGR VVSNEEEAFA LYNNYALGIG FSVRKGKVRY SAESKNVKQR EYVCSKKGFK 60 LDDISSENKM VNRLDTQTGC ATFIRFTVEK DVWKVTRFIP THNHELASVK ERHLLRSGRN 120 ISNAKAAVIN TMENAGILTK DAFSFLSEEH GGFENIGFTK REYYNHVNKQ KLMKIDAGDA 180 QSLMNYFKRK KAEDPIFFYA VQVDQKNRMT NFFFGEMGVN HHWQNVLFGC AFLLDEKIDS 240 FKWLFHSFLE SMGNRPPITI FTDQDSAMSN AIKVVFPTTH HRLYLWHISK NAPSHFGSLN 300 SNLEFQKLWK KCCTGCESVI EFQETWDEMI RRYDISDNNW FNLMYTVREK WSTMFTKGSF 360 TAGIKSSQRS ESTNNLLTGI ANITTSLTHF SLAYENIVAG LRSKELDEDF RCKQGKPVTA 420 VKYSGILEHA VKIYTCKMYM LFEKEFLHSL ATLWREVTND GLFCTYEVKE EANERVHMVH 480 FNIFNHQISC TCKKFESKGI LCSHALRVFS VRNVTSIPNQ YILKRWTKEA KRGMMLYEKN 540 IHFPGNKEEV ELVWRHSMMR IASNLIYKCQ GNDSTRQMCQ EGLMNLEVKL DRQLARLKLG 600 EAHVDDNDDH GNVAKDKEKD EMPLLDPPHA RPKGVRNARI KGHFEKRKTK SSIKISIGVI 660 TAEEKLLCKP EQEIMKKKKK QHLQLRPHNG NGKSKVVKIA NGRDVNVWRD PWIIDNYNFL 720 METLVVDGLD GCKVSEFIDE VTRHWNINKL QDLLLLNDVE KIVKITLSFT GACDKRIWHH 780 SKSIVYTFKI GYHVALNVFE DRPHLIIPSL WCQLWRMQVP PKC

Sequence ? help Back to Top

Protein Sequence Length: 823 aa Download sequence

MSNDDNLLGR VVSNEEEAFA LYNNYALGIG FSVRKGKVRY SAESKNVKQR EYVCSKKGFK  60
LDDISSENKM VNRLDTQTGC ATFIRFTVEK DVWKVTRFIP THNHELASVK ERHLLRSGRN  120
ISNAKAAVIN TMENAGILTK DAFSFLSEEH GGFENIGFTK REYYNHVNKQ KLMKIDAGDA  180
QSLMNYFKRK KAEDPIFFYA VQVDQKNRMT NFFFGEMGVN HHWQNVLFGC AFLLDEKIDS  240
FKWLFHSFLE SMGNRPPITI FTDQDSAMSN AIKVVFPTTH HRLYLWHISK NAPSHFGSLN  300
SNLEFQKLWK KCCTGCESVI EFQETWDEMI RRYDISDNNW FNLMYTVREK WSTMFTKGSF  360
TAGIKSSQRS ESTNNLLTGI ANITTSLTHF SLAYENIVAG LRSKELDEDF RCKQGKPVTA  420
VKYSGILEHA VKIYTCKMYM LFEKEFLHSL ATLWREVTND GLFCTYEVKE EANERVHMVH  480
FNIFNHQISC TCKKFESKGI LCSHALRVFS VRNVTSIPNQ YILKRWTKEA KRGMMLYEKN  540
IHFPGNKEEV ELVWRHSMMR IASNLIYKCQ GNDSTRQMCQ EGLMNLEVKL DRQLARLKLG  600
EAHVDDNDDH GNVAKDKEKD EMPLLDPPHA RPKGVRNARI KGHFEKRKTK SSIKISIGVI  660
TAEEKLLCKP EQEIMKKKKK QHLQLRPHNG NGKSKVVKIA NGRDVNVWRD PWIIDNYNFL  720
METLVVDGLD GCKVSEFIDE VTRHWNINKL QDLLLLNDVE KIVKITLSFT GACDKRIWHH  780
SKSIVYTFKI GYHVALNVFE DRPHLIIPSL WCQLWRMQVP PKC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-101	FAR1 family protein