PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021653679.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | ARF | ||||||||
Protein Properties | Length: 663aa MW: 73711.4 Da PI: 7.0949 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 74.4 | 1.3e-23 | 110 | 211 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ ++ + t++ +d +g+ W++++iyr++++r++lt+GW+ Fv++++L +gD++vF + + XP_021653679.1 110 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL--RAE 200 89****************************996555555..8************************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_021653679.1 201 NGDLFVGIRRA 211 8889****997 PP | |||||||
2 | Auxin_resp | 114.6 | 9e-38 | 274 | 357 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa a+++++FevvY+Prast+eF+vk+++v++a++++++ GmRfkmafetedss+ ++ +Gtv++v+ +d +rWpnS+Wr+L+ XP_021653679.1 274 AAALAANGQPFEVVYYPRASTPEFCVKASSVRAAMRIQWCSGMRFKMAFETEDSSRVSWfMGTVASVQVSDLIRWPNSPWRLLQ 357 678899****************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 663 aa Download sequence |
MKELEKSLDP QLWHACSGSM VQIPPVNSRV FYFPQGHAEH SQSPVDFSSS LRIPALILCR 60 VAAVKYLADL ETDEVYAKIS LVALPNNELD FGEEMGICDN GNNTEKPASF AKTLTQSDAN 120 NGGGFSVPRY CAETIFPRLD YSADPPVQTV VAKDVHGEIW KFRHIYRGTP RRHLLTTGWS 180 TFVNQKKLVA GDSIVFLRAE NGDLFVGIRR AKRGSGIGNG PESSSPPSGW TANASYVKPY 240 GGFSLFLRED ENKGMRNGGL RGREKVRPEE VLEAAALAAN GQPFEVVYYP RASTPEFCVK 300 ASSVRAAMRI QWCSGMRFKM AFETEDSSRV SWFMGTVASV QVSDLIRWPN SPWRLLQVTW 360 DEPDLLQNVK RVNPWLVELV SNMPVIHLSP FSPPRKKLRL PQHLDFPLDG QFQWPSFLGN 420 PLGPSSPLCC LSDNTPAGIQ GARHAQFGIS LSDLQLNNKM QSGLFLSGLQ RFNSHSRISE 480 SFMKGHTNSN ENLSCLLTMG NSNTNSEKSD NVKTHQFLLF GQPILTEQQI SHSCSTDAVS 540 QVLSGKFSSD ESLEKAKCHY VLGSAHEKQT LPEKPANTGL SWQNLRNTET GLDAGQCKVF 600 LESEDVGRTL DLSVLGSYEE LHTRLAKMFG IERSDMFSHV LYRDAMGDVK RMGDEPFSGL 660 PWY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28350.1 | 0.0 | ARF family protein |