PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021653527.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | C2H2 | ||||||||
Protein Properties | Length: 195aa MW: 21904.8 Da PI: 8.3963 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.3 | 5.6e-05 | 23 | 45 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++ F++ L H+++H XP_021653527.1 23 YTCSFCKRQFNSAQALGGHMNVH 45 9********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MERTCFGSEG DNSSGFLWPQ RNYTCSFCKR QFNSAQALGG HMNVHRRDRA MLIQLPSWVF 60 ECPNPNPNFS SSTSLSLSSS RSTSAKLLSY PCTTHHSLLS PSLTSFSSSP SYQDKKSTAL 120 ECPQRDSSTP LSEDLKKKKK KSMRAVVEVE EFNKGFAQKY ELEVLKKSEV ISLDLEIGCK 180 DPKEVLDLEL RLGCF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42410.1 | 6e-25 | C2H2 family protein |