PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653370.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HB-other

Protein Properties

Length: 534aa MW: 59666.8 Da PI: 8.5778

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653370.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.8	4.5e-19	21	75	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t+ q+ +Le+++++++yp++e++ eLA+++gLte+q++ WF+ rR k+k+ XP_021653370.1 21 KRILKTPAQIMALEKFYNEHNYPTEEMKSELAEQIGLTEKQISSWFCHRRLKDKR 75 78899************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MGDSNEVHSE ENGVSPEKNT KRILKTPAQI MALEKFYNEH NYPTEEMKSE LAEQIGLTEK 60 QISSWFCHRR LKDKRLSKDE AFDKRLSKDE MCASGRQDRS SGIIQDRGSG LRQDSCGSTK 120 QGDYRKVDPK EVESQRLYGH NLPAADVTYD RTSRYTGNVN GTDDTSSESS SSLQDKLFSQ 180 SEDLHDMKDS GYVAHNGASK SLIPRGANKM RYKPSGYLKV KGEIENAAIT AVKRQLGKHY 240 REDGPPLGVE FQPLPPGAFS SSSRDPVNGA FYVGDLARIH SPDVSGVRKQ SSLSSRYEVY 300 SSKMNSQDSY MEGPSCNLKN ASDSHDKKSH HQIKRKSTSY DYSNCTPGGK SAMDKYDDLA 360 AETSIHSSKR NYKLSSMHGV EGIGPHTVSN HHHPDGGKAI SEQTDPWLHD YGNGSPNIVQ 420 KNDYTSKSLN LITGFSKSLD AQERVLSTIT EKEKPYREIK GTKEYRDTVR VRMHPTNEMT 480 ISKRFRAEFS QQQYVTKAAF PNMPRKTNSN KGSAIDRPSS FSEDETAETS SSVD

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MGDSNEVHSE ENGVSPEKNT KRILKTPAQI MALEKFYNEH NYPTEEMKSE LAEQIGLTEK  60
QISSWFCHRR LKDKRLSKDE AFDKRLSKDE MCASGRQDRS SGIIQDRGSG LRQDSCGSTK  120
QGDYRKVDPK EVESQRLYGH NLPAADVTYD RTSRYTGNVN GTDDTSSESS SSLQDKLFSQ  180
SEDLHDMKDS GYVAHNGASK SLIPRGANKM RYKPSGYLKV KGEIENAAIT AVKRQLGKHY  240
REDGPPLGVE FQPLPPGAFS SSSRDPVNGA FYVGDLARIH SPDVSGVRKQ SSLSSRYEVY  300
SSKMNSQDSY MEGPSCNLKN ASDSHDKKSH HQIKRKSTSY DYSNCTPGGK SAMDKYDDLA  360
AETSIHSSKR NYKLSSMHGV EGIGPHTVSN HHHPDGGKAI SEQTDPWLHD YGNGSPNIVQ  420
KNDYTSKSLN LITGFSKSLD AQERVLSTIT EKEKPYREIK GTKEYRDTVR VRMHPTNEMT  480
ISKRFRAEFS QQQYVTKAAF PNMPRKTNSN KGSAIDRPSS FSEDETAETS SSVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	1e-99	HB-other family protein