PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021653360.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 241aa    MW: 27639.3 Da    PI: 9.7903
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021653360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.31.5e-312473150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+
  XP_021653360.1 24 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 73
                    79***********************************************8 PP
2K-box110.71.5e-36911883100
           K-box   3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                     +ss+ s++ea+a+++qqe+akL+ +i+nLq+++ ++lGe+L+ L++keL++Le +Lek++++iRskKnell+++ie++qk+e +l+++n+ Lr+k
  XP_021653360.1  91 SSSTGSVSEANAQYYQQEAAKLRVQISNLQNSNGNMLGESLGALNVKELKSLEIRLEKGISRIRSKKNELLFAEIEYMQKREIDLHSNNQLLRAK 185
                     5666679**************************************************************************************** PP

           K-box  98 lee 100
                     ++e
  XP_021653360.1 186 IAE 188
                     986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MAYPSECREN SPQRKMGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL  60
IVFSSRGRLY EYANNSVKST IERYKKACAD SSSTGSVSEA NAQYYQQEAA KLRVQISNLQ  120
NSNGNMLGES LGALNVKELK SLEIRLEKGI SRIRSKKNEL LFAEIEYMQK REIDLHSNNQ  180
LLRAKIAENE RKQQNMNMMP GGGNYEITQS QTFDNRNYFQ VNALQPTNHY PHQDQMALQI  240
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18960.11e-117MIKC_MADS family protein