PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653157.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 686aa MW: 76668.1 Da PI: 5.2287

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653157.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.2	1.7e-14	475	521	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL +++Y+k+L+ XP_021653157.1 475 NHVLAERRRREKLNERFMILRSLVPFV-----TKMDKASILGDTIDYVKQLR 521 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MAAPPSSRLQ SMLQAAAQSV QWTYSLFWQI CPQQRILVWG DGYYNGAIKT RKTVQPMEVG 60 AVEASLQRSQ QLRDLYESLS AGETKQTARR PSAALSPEDL TESEWFYLMC VSFSFPPGTG 120 LPGKAYARLQ HVWLTGANES DSKTFSRAIL AKSAHIQTVV CIPLLDGVVE LGTTEKVQED 180 LGFVQRVKSI FTDHHHPISL PPKPALSEHS TSNTDTSSDQ RPHFQSPIPS IYGATDPPTN 240 DNQDDDDDDD EEEEDDDEEE EERSDSEGET GRNTRSVPTQ AETVTAEPSE LMQLEMSEDI 300 RLGSPDDGSN NMESDFQLIS SGKLTGHHQS RADSLRAESA GRWVIVQDPL CSSLEPVAAA 360 GPHALKEMAQ EDTHYSQTVS GILQNQRIRW AESSSLPYLS YSNQSAFTKC TNRCSDHLLH 420 LPIEGPSQWF LKYILFSVPY LHHKYLEENS PKPRDGDDAN RFRKGGAALD ELSANHVLAE 480 RRRREKLNER FMILRSLVPF VTKMDKASIL GDTIDYVKQL RQKIQELEAR NRQMEIEQRS 540 RLVDPPQRTS SLKEQRSAVP VMDRARIVPG YGPTSDKKKL RIVDGSGGCT KPKTVETSPL 600 VEAETSVEVS IIECDALLEI QCGYREGLLL DIMQMLREIR IEITAVQSSL NNGVLMAELR 660 AKVKDNVAGK KVSIVKVKRA IHQIIP

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MAAPPSSRLQ SMLQAAAQSV QWTYSLFWQI CPQQRILVWG DGYYNGAIKT RKTVQPMEVG  60
AVEASLQRSQ QLRDLYESLS AGETKQTARR PSAALSPEDL TESEWFYLMC VSFSFPPGTG  120
LPGKAYARLQ HVWLTGANES DSKTFSRAIL AKSAHIQTVV CIPLLDGVVE LGTTEKVQED  180
LGFVQRVKSI FTDHHHPISL PPKPALSEHS TSNTDTSSDQ RPHFQSPIPS IYGATDPPTN  240
DNQDDDDDDD EEEEDDDEEE EERSDSEGET GRNTRSVPTQ AETVTAEPSE LMQLEMSEDI  300
RLGSPDDGSN NMESDFQLIS SGKLTGHHQS RADSLRAESA GRWVIVQDPL CSSLEPVAAA  360
GPHALKEMAQ EDTHYSQTVS GILQNQRIRW AESSSLPYLS YSNQSAFTKC TNRCSDHLLH  420
LPIEGPSQWF LKYILFSVPY LHHKYLEENS PKPRDGDDAN RFRKGGAALD ELSANHVLAE  480
RRRREKLNER FMILRSLVPF VTKMDKASIL GDTIDYVKQL RQKIQELEAR NRQMEIEQRS  540
RLVDPPQRTS SLKEQRSAVP VMDRARIVPG YGPTSDKKKL RIVDGSGGCT KPKTVETSPL  600
VEAETSVEVS IIECDALLEI QCGYREGLLL DIMQMLREIR IEITAVQSSL NNGVLMAELR  660
AKVKDNVAGK KVSIVKVKRA IHQIIP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	480	485	ERRRRE
2	481	486	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	1e-102	bHLH family protein