PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021653038.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 635aa MW: 70173.3 Da PI: 7.0137

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021653038.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92.9	3.2e-29	85	169	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r+++ k+plWeevs+k++e g++rs+k+Ckek+en+ k++k++keg+ ++ ++ +t+++fdqlea XP_021653038.1 85 RWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSRKLAELGYNRSAKKCKEKFENVFKYHKRTKEGRTGK--QEGKTYRFFDQLEA 169 8******************************************************************96..55557*****85 PP
2	trihelix	104.5	7.7e-33	464	549	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev aLi++r++++++++++ k+plWee+s+ +r+ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a XP_021653038.1 464 RWPKVEVEALIKMRTNLDSKYQENGPKGPLWEEISAGIRKLGYNRSAKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 549 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 635 aa Download sequence
MLGDSSSVLA TTTTAADGGG GGAAAATGGS SRDPPPTPPP LSTHQIPGGG THESISEIGH 60 VGSNNSGEDD RGRGDEGDRS FGGNRWPRQE TLALLKIRSD MDVAFRDASV KGPLWEEVSR 120 KLAELGYNRS AKKCKEKFEN VFKYHKRTKE GRTGKQEGKT YRFFDQLEAF ENHPSSLSSP 180 QPPQPQPPQQ QQLKPQTPAV TTIAMPVVNP RPPPPPLSGG APPISTVTST TPPTAASMSQ 240 GIVTAGINLT IPSFPPANPT ILPSAQATNP TINPSSFSNF SPDLHFNSTS SSTSSDVELR 300 GRQRKKRKWK DFFERIMKEV IHKQEDMQRK FLEAIEKREH DRMVREESWR MQEMARINRE 360 REILAQERSI AAAKDAAIMG FLQKLSEQQN PGQIQNNPPT AHPPPPQPPA ATTVPVPAPP 420 VPTPTPQPIT VVPVAPAAPP QYATNLDTKS DSGDQILTPP SSSRWPKVEV EALIKMRTNL 480 DSKYQENGPK GPLWEEISAG IRKLGYNRSA KRCKEKWENI NKYFKKVKES NKKRPEDSKT 540 CPYFHQLDAL YKEKNKNDPS SNIQLKPENS VPLLVRPEQQ WPPPQQEHGP DSVMEDLESE 600 DHQNHQDEDD KDNDDEEEDE AGGYEIVAKK PTTMS

Sequence ? help Back to Top

Protein Sequence Length: 635 aa Download sequence

MLGDSSSVLA TTTTAADGGG GGAAAATGGS SRDPPPTPPP LSTHQIPGGG THESISEIGH  60
VGSNNSGEDD RGRGDEGDRS FGGNRWPRQE TLALLKIRSD MDVAFRDASV KGPLWEEVSR  120
KLAELGYNRS AKKCKEKFEN VFKYHKRTKE GRTGKQEGKT YRFFDQLEAF ENHPSSLSSP  180
QPPQPQPPQQ QQLKPQTPAV TTIAMPVVNP RPPPPPLSGG APPISTVTST TPPTAASMSQ  240
GIVTAGINLT IPSFPPANPT ILPSAQATNP TINPSSFSNF SPDLHFNSTS SSTSSDVELR  300
GRQRKKRKWK DFFERIMKEV IHKQEDMQRK FLEAIEKREH DRMVREESWR MQEMARINRE  360
REILAQERSI AAAKDAAIMG FLQKLSEQQN PGQIQNNPPT AHPPPPQPPA ATTVPVPAPP  420
VPTPTPQPIT VVPVAPAAPP QYATNLDTKS DSGDQILTPP SSSRWPKVEV EALIKMRTNL  480
DSKYQENGPK GPLWEEISAG IRKLGYNRSA KRCKEKWENI NKYFKKVKES NKKRPEDSKT  540
CPYFHQLDAL YKEKNKNDPS SNIQLKPENS VPLLVRPEQQ WPPPQQEHGP DSVMEDLESE  600
DHQNHQDEDD KDNDDEEEDE AGGYEIVAKK PTTMS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	299	308	LRGRQRKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	3e-61	Trihelix family protein