PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021652947.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 448aa MW: 49285.4 Da PI: 7.0724

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021652947.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.7	6.4e-06	338	376	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L XP_021652947.1 338 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 376 5778999********998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MADEFNTSTN WWDSSRNRFD SGSSSSSSGL NSLGSFAWPS EVVNVKGRPS IESASVSGSS 60 AVFHDTQKLQ QGQDSSADLH MMGLGLSSQA MDWNPALLRS DKAESGIRSM LQENLNSSAS 120 YQHETGIGSS QVQWRERMFS GVSSHSSMNE FKQMNRGVLD QPQFSPHGSS SDSTVTCQGL 180 QSSNFQMDST AIYGSPSTML QGLLGSDNQP QQQCSFENRS MSYPYGANYG ITTNELVPSW 240 SNKVPPFLRN SPPKQLSQLH FSNNAPFWNA SASSMNDVRP SFFPSLQPQF PASNFEEKPK 300 QNISEVRDSS TTVKKSGSEQ ATKRPRNETP SPMPAFKVRK EKMGDRITAL QQLVSPFGKT 360 DTASVLSEAI EYIKFLHEQV TVLSTPYLKS GAPIHHQQSS DKSNKDSEGQ KQDLRSRGLC 420 LVPVSSTFPV THETTVDFWT PTFGGTFR

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MADEFNTSTN WWDSSRNRFD SGSSSSSSGL NSLGSFAWPS EVVNVKGRPS IESASVSGSS  60
AVFHDTQKLQ QGQDSSADLH MMGLGLSSQA MDWNPALLRS DKAESGIRSM LQENLNSSAS  120
YQHETGIGSS QVQWRERMFS GVSSHSSMNE FKQMNRGVLD QPQFSPHGSS SDSTVTCQGL  180
QSSNFQMDST AIYGSPSTML QGLLGSDNQP QQQCSFENRS MSYPYGANYG ITTNELVPSW  240
SNKVPPFLRN SPPKQLSQLH FSNNAPFWNA SASSMNDVRP SFFPSLQPQF PASNFEEKPK  300
QNISEVRDSS TTVKKSGSEQ ATKRPRNETP SPMPAFKVRK EKMGDRITAL QQLVSPFGKT  360
DTASVLSEAI EYIKFLHEQV TVLSTPYLKS GAPIHHQQSS DKSNKDSEGQ KQDLRSRGLC  420
LVPVSSTFPV THETTVDFWT PTFGGTFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	2e-85	bHLH family protein