PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021652668.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | GATA | ||||||||
Protein Properties | Length: 208aa MW: 24074.2 Da PI: 5.4291 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 53.4 | 3.5e-17 | 150 | 179 | 1 | 30 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyy 30 Cs+C t kTp+WR gp+g+ktLCnaCG+++ XP_021652668.1 150 CSHCETDKTPQWRLGPSGPKTLCNACGVRF 179 ***************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MANVYDHALD DPIEDLECQL CIPQDPIEDL EWFPSFSTDL ISLSDLCFTL EHEPLSLFDD 60 FRAYTESPAD FPVTPEQTIE KVEENKSTTI IANKKRLRSL EPFTFTGFTH KKQRSNRVLK 120 QRKRDAWDFE SEKASSAMGD DLFRKVERRC SHCETDKTPQ WRLGPSGPKT LCNACGVRFW 180 PARQIEKRGE SLVGHTKSEK EMMPDKKI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32890.1 | 4e-20 | GATA family protein |