PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021652657.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 361aa MW: 39884.2 Da PI: 7.3431

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021652657.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.5	9.6e-18	175	229	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++++eq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k XP_021652657.1 175 RKKLRLSQEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 229 778899***********************************************98 PP
2	HD-ZIP_I/II	126.7	1e-40	175	265	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rls+eq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr+++al+een+rL+ke +eLr +lk XP_021652657.1 175 RKKLRLSQEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCEALTEENRRLNKELQELR-ALK 265 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MELGLSLGDA SKPFGFMEKS SDVPNRGSLS FCMALSIGPN QYQEQEHSND NSKDTASTKI 60 NTPTHHHHLS PVDLPLIQLD LLPNTPVPRS NHHHALSWPS SDNNNGNLAR GLDVNRLPAV 120 GEAEDGPALS SSPPNSAASS FQMDFCIYSK SGNHEAEVER ASSRASDEDE NGSTRKKLRL 180 SQEQSAFLEE SFKEHSTLNP KQKLALAKQL NLRPRQVEVW FQNRRARTKL KQTEVDCEYL 240 KRCCEALTEE NRRLNKELQE LRALKTSNPF YMQLPATTLT MCPSCERVAT TSTATATTTT 300 TTTATPSTMM KATSTTYKDN NNNSEPTSKA TATGLSLVTA RPRFYPFSDQ TQAHGHQPTS 360 S

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MELGLSLGDA SKPFGFMEKS SDVPNRGSLS FCMALSIGPN QYQEQEHSND NSKDTASTKI  60
NTPTHHHHLS PVDLPLIQLD LLPNTPVPRS NHHHALSWPS SDNNNGNLAR GLDVNRLPAV  120
GEAEDGPALS SSPPNSAASS FQMDFCIYSK SGNHEAEVER ASSRASDEDE NGSTRKKLRL  180
SQEQSAFLEE SFKEHSTLNP KQKLALAKQL NLRPRQVEVW FQNRRARTKL KQTEVDCEYL  240
KRCCEALTEE NRRLNKELQE LRALKTSNPF YMQLPATTLT MCPSCERVAT TSTATATTTT  300
TTTATPSTMM KATSTTYKDN NNNSEPTSKA TATGLSLVTA RPRFYPFSDQ TQAHGHQPTS  360
S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	174	180	TRKKLRL
2	224	232	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	6e-74	HD-ZIP family protein