PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021652310.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 438aa MW: 48745.1 Da PI: 7.3135

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021652310.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.1	2e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+++++++G g+W+++++ g+ R++k+c++rw +yl XP_021652310.1 14 KGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	43.3	8.6e-14	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++++E+ l+++++ lG++ W+ Ia+ ++ gRt++++k+ w+ XP_021652310.1 67 RGAFSQQEENLIIELHSVLGNR-WSQIAAQLP-GRTDNEIKNLWN 109 89******************.*****.*******998 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGAF SQQEENLIIE LHSVLGNRWS QIAAQLPGRT DNEIKNLWNS SIKKKLRQRG 120 IDPNTHKPLS EVENDKEKQP TNNKNNEKAS ILSNNELNLI EPANSKPSIV SSSSKITSNN 180 DHSSNLTPTP PTQEFFLDRF ATSHESSTPS CRPSVLVGYL PFQKLSYSPN IGLSVNPNTS 240 ICFNPNSSSS EMISEFNSSM TPSILQSMSS SMFQTSIRVK PSVSLPSDNP SVGSCDVSGV 300 QNWEAVSFSN NGSSSHGSSS SIELQNNNNF FESNTFSWGL ADCGKPGEEA QLRSLENDPE 360 DIKWSEYLST PFLLGTAIQN QTSQPMYSEV KPETNFITEG SSASWQQNHN HHHQQASQPS 420 DIYAKDLQRL AVAFGQTL

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGAF SQQEENLIIE LHSVLGNRWS QIAAQLPGRT DNEIKNLWNS SIKKKLRQRG  120
IDPNTHKPLS EVENDKEKQP TNNKNNEKAS ILSNNELNLI EPANSKPSIV SSSSKITSNN  180
DHSSNLTPTP PTQEFFLDRF ATSHESSTPS CRPSVLVGYL PFQKLSYSPN IGLSVNPNTS  240
ICFNPNSSSS EMISEFNSSM TPSILQSMSS SMFQTSIRVK PSVSLPSDNP SVGSCDVSGV  300
QNWEAVSFSN NGSSSHGSSS SIELQNNNNF FESNTFSWGL ADCGKPGEEA QLRSLENDPE  360
DIKWSEYLST PFLLGTAIQN QTSQPMYSEV KPETNFITEG SSASWQQNHN HHHQQASQPS  420
DIYAKDLQRL AVAFGQTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	1e-118	MYB family protein