PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021652037.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 345aa MW: 39540.5 Da PI: 10.0931

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021652037.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.9	2e-17	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll+ +vkq+G++ W++I+r+m+ ++R +k+c +rw +yl XP_021652037.1 4 RQRWQPEEDALLKAYVKQYGPKEWNLISRRMPkpLNRDPKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	33.4	1.1e-10	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T++E+ l + + ++G++ Wk+Ia+ ++ gRt+k + +w + XP_021652037.1 59 RGSLTPDEQSLVISLQSKYGNR-WKKIAAQLP-GRTAKRLGKWWEVF 103 7889****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MKERQRWQPE EDALLKAYVK QYGPKEWNLI SRRMPKPLNR DPKSCLERWK NYLKPGIKRG 60 SLTPDEQSLV ISLQSKYGNR WKKIAAQLPG RTAKRLGKWW EVFKEKQSKL NPQGNIPVIG 120 DKLGQGRYDH ILDTFAEKYV QSNILKFQSS LCYPATLPGD AGLNSVSLMS DPDPVLSLGS 180 VWMNAASSLS FSTTTTASLT PSLSVSLSLS PSDPGMDPEL TRFTRGQNMG TLIQYCKVME 240 EGRQNWVQHK KEAIWRLSRL EQQLESEKAR KMRDKMVEIE AKIRLLREEE MGFMSRIESD 300 YREQLNTLQK DAESKEAELV KAWCSKHAKL EKLVKQIGGG IMFNN

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MKERQRWQPE EDALLKAYVK QYGPKEWNLI SRRMPKPLNR DPKSCLERWK NYLKPGIKRG  60
SLTPDEQSLV ISLQSKYGNR WKKIAAQLPG RTAKRLGKWW EVFKEKQSKL NPQGNIPVIG  120
DKLGQGRYDH ILDTFAEKYV QSNILKFQSS LCYPATLPGD AGLNSVSLMS DPDPVLSLGS  180
VWMNAASSLS FSTTTTASLT PSLSVSLSLS PSDPGMDPEL TRFTRGQNMG TLIQYCKVME  240
EGRQNWVQHK KEAIWRLSRL EQQLESEKAR KMRDKMVEIE AKIRLLREEE MGFMSRIESD  300
YREQLNTLQK DAESKEAELV KAWCSKHAKL EKLVKQIGGG IMFNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	3e-98	MYB family protein