PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021651871.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | HD-ZIP | ||||||||
Protein Properties | Length: 290aa MW: 32980.9 Da PI: 6.5109 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56 | 6.5e-18 | 83 | 136 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k XP_021651871.1 83 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 136 456899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 129.2 | 1.7e-41 | 82 | 172 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqvk+LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+++a+k++n++L++++++L++e+ XP_021651871.1 82 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKADNDALKAQNQKLHAEI 172 69**************************************************************************************987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 290 aa Download sequence |
MTCNGMAFFP ANFMLQTPHE EDHHQPPTSL NPILPSCTSQ DFHGVASFLG KRSMSFSGID 60 ASCHEEGNGE DELSDDGSQA GEKKRRLNME QVKTLEKNFE LGNKLEPERK MQLARALGLQ 120 PRQIAIWFQN RRARWKTKQL EKDYDLLKRQ FEAIKADNDA LKAQNQKLHA EILALKSREP 180 TESINLNKET EGSCSNRSEN SSDIKLDISR TPAIDSPLSN HPTNRPLFPS SSIRPTGVAQ 240 LFQNNSSRSD HIHCQKNIEQ MVKEESLSNM FCGIDDQSGF WPWLEQQHFN |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 131 | 139 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G69780.1 | 1e-126 | HD-ZIP family protein |