PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021651869.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 298aa MW: 34004.6 Da PI: 9.0007

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021651869.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56	6.8e-18	91	144	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k XP_021651869.1 91 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 144 456899***********************************************9 PP
2	HD-ZIP_I/II	129.1	1.8e-41	90	180	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqvk+LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+++a+k++n++L++++++L++e+ XP_021651869.1 90 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKADNDALKAQNQKLHAEI 180 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MGWRSSQLIS CSKLRMKKII INLPLLSIQF YPHVHPKTSM FLFLHLVVLG AGVASFLGKR 60 SMSFSGIDAS CHEEGNGEDE LSDDGSQAGE KKRRLNMEQV KTLEKNFELG NKLEPERKMQ 120 LARALGLQPR QIAIWFQNRR ARWKTKQLEK DYDLLKRQFE AIKADNDALK AQNQKLHAEI 180 LALKSREPTE SINLNKETEG SCSNRSENSS DIKLDISRTP AIDSPLSNHP TNRPLFPSSS 240 IRPTGVAQLF QNNSSRSDHI HCQKNIEQMV KEESLSNMFC GIDDQSGFWP WLEQQHFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	147	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	1e-106	HD-ZIP family protein