PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021651844.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 440aa MW: 48924 Da PI: 6.6815

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021651844.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.8	1.2e-10	368	413	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L++l P+ +k s a+ L +AveYIk+Lq XP_021651844.1 368 SIAERVRRTRISERMRKLQDLFPNM----DKQTSTADKLDLAVEYIKELQ 413 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MMYGILGGFQ GPSEQEDMSL LYSPSFNYQD GELRRNQELM DLNHHNYHQE QHQHNSGLMR 60 YRSAPSSFIE SLVNGTSGHG GNGGGGGIEV EDSQYFRPSS PEMDAMLARF MSTYNGSGDS 120 NSQNLKEYGE RPAMKQEMDD SQMVYQSSPV NNLANNGNSV DVSNSLDSTF GVMNSMALEK 180 SMQASKMSTV NGSNLVRQNS SPAGFFYNLG VDNGFTVTED VGGFRACNGL NGEANPSKSR 240 LSNHLNFPSG QRLLPQIAEI GDENPGTSSP EGNTRKRQYM NFANDTWDDS SSNDFKRFRS 300 NDENVFSGLY MMGNQSENSG NRVTGLTHHL SLPKTAAEMA TVEKFLQFQG SIPCKIRAKR 360 GFATHPRSIA ERVRRTRISE RMRKLQDLFP NMDKQTSTAD KLDLAVEYIK ELQKQVETLK 420 DTRAKCMCSS KQKQYSNSSA

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MMYGILGGFQ GPSEQEDMSL LYSPSFNYQD GELRRNQELM DLNHHNYHQE QHQHNSGLMR  60
YRSAPSSFIE SLVNGTSGHG GNGGGGGIEV EDSQYFRPSS PEMDAMLARF MSTYNGSGDS  120
NSQNLKEYGE RPAMKQEMDD SQMVYQSSPV NNLANNGNSV DVSNSLDSTF GVMNSMALEK  180
SMQASKMSTV NGSNLVRQNS SPAGFFYNLG VDNGFTVTED VGGFRACNGL NGEANPSKSR  240
LSNHLNFPSG QRLLPQIAEI GDENPGTSSP EGNTRKRQYM NFANDTWDDS SSNDFKRFRS  300
NDENVFSGLY MMGNQSENSG NRVTGLTHHL SLPKTAAEMA TVEKFLQFQG SIPCKIRAKR  360
GFATHPRSIA ERVRRTRISE RMRKLQDLFP NMDKQTSTAD KLDLAVEYIK ELQKQVETLK  420
DTRAKCMCSS KQKQYSNSSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	7e-68	bHLH family protein