PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021651421.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 503aa MW: 55064.6 Da PI: 6.5138

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021651421.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.4	8.3e-16	297	343	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq XP_021651421.1 297 VHNLSERRRRDRINEKMRALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 343 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MELLWQNGQV VVQSQTQTPF KKSQHHKYDD DVPPVDQSNP REIRSSHEQQ QQLLFMQEDE 60 MAAWLHYPLN DTNFDQDFCA DLPYPSTACV TSTTTNTSAA PIHSNLDPET RPQPAVSATA 120 AASRPPIPPT RRAEVVQNFG YFSRHRATVG KSESGPSNLK TVLRELTVVD SNDTPAMGSE 180 SRISEAADGR STTVVSSGDN ACGTMSGTAV AGTSSQAGAS NNSKDKMTCE MTVTSSPGGS 240 SSSTEPPSQK PAAEDRKRKG KEVDTEYHSE DFEFESADAK RQLRRSTSTK RSRAAEVHNL 300 SERRRRDRIN EKMRALQELI PRCNKSDKAS MLDEAIEYLK SLQLQVQMMS MGCSIVPMMF 360 PGIQQHMPPL GIGMGMGMGM EMGMNRPMMP FPNVLAGASM PTPAAAAHLG PRFPMPAFHM 420 PPVPSPAPDQ SRIQAINQSD PMISTQNPNQ PRVPNFADPY QQYLGLQQMQ IPVSQNQVMT 480 QPSTSKPGTS QVAENLDNHQ SGT

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MELLWQNGQV VVQSQTQTPF KKSQHHKYDD DVPPVDQSNP REIRSSHEQQ QQLLFMQEDE  60
MAAWLHYPLN DTNFDQDFCA DLPYPSTACV TSTTTNTSAA PIHSNLDPET RPQPAVSATA  120
AASRPPIPPT RRAEVVQNFG YFSRHRATVG KSESGPSNLK TVLRELTVVD SNDTPAMGSE  180
SRISEAADGR STTVVSSGDN ACGTMSGTAV AGTSSQAGAS NNSKDKMTCE MTVTSSPGGS  240
SSSTEPPSQK PAAEDRKRKG KEVDTEYHSE DFEFESADAK RQLRRSTSTK RSRAAEVHNL  300
SERRRRDRIN EKMRALQELI PRCNKSDKAS MLDEAIEYLK SLQLQVQMMS MGCSIVPMMF  360
PGIQQHMPPL GIGMGMGMGM EMGMNRPMMP FPNVLAGASM PTPAAAAHLG PRFPMPAFHM  420
PPVPSPAPDQ SRIQAINQSD PMISTQNPNQ PRVPNFADPY QQYLGLQQMQ IPVSQNQVMT  480
QPSTSKPGTS QVAENLDNHQ SGT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	302	307	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	3e-67	bHLH family protein