PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021651097.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 365aa MW: 41531.4 Da PI: 5.8475

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021651097.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50	7e-16	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++ Ed++lv ++++G ++W++ ++ g+ R++k+c++rw +yl XP_021651097.1 16 KGPWSPAEDLRLVTFIQKHGHENWRALPKQAGLLRCGKSCRLRWINYL 63 79****************************99**********97 PP
2	Myb_DNA-binding	56.2	8e-18	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE+e ++++++ lG++ W++Ia++++ gRt++++k+ w+++l XP_021651097.1 69 RGNFTKEEEEAIIKLHQTLGNK-WSKIASHFP-GRTDNEIKNVWNTHL 114 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MGKGRAPCCD KSQVKKGPWS PAEDLRLVTF IQKHGHENWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDVKRG NFTKEEEEAI IKLHQTLGNK WSKIASHFPG RTDNEIKNVW NTHLKKRLAF 120 KVPHSSGGEL KESSSISSSS SSTIMSGGKR NMAIELDDQW KHVSVTKRTR VLEDIQDLHM 180 EVTRDEFRTT NKEAQELPSS SSSSSSDNSN VTNYSQVDVS LPDDQMGSLV NFSGAYVRNT 240 LEEVSKPEIQ DIAAVEIPSE SDLDFWNMLD GLYSLQTNEE VQLHNVETNK NSSLGVEYNG 300 EVENRKWLRY LENELGLEPA RDGKQQNLLE DAAESFLVPE NYQFEIPMKP EVNSGMEYYH 360 LWPSL

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MGKGRAPCCD KSQVKKGPWS PAEDLRLVTF IQKHGHENWR ALPKQAGLLR CGKSCRLRWI  60
NYLRPDVKRG NFTKEEEEAI IKLHQTLGNK WSKIASHFPG RTDNEIKNVW NTHLKKRLAF  120
KVPHSSGGEL KESSSISSSS SSTIMSGGKR NMAIELDDQW KHVSVTKRTR VLEDIQDLHM  180
EVTRDEFRTT NKEAQELPSS SSSSSSDNSN VTNYSQVDVS LPDDQMGSLV NFSGAYVRNT  240
LEEVSKPEIQ DIAAVEIPSE SDLDFWNMLD GLYSLQTNEE VQLHNVETNK NSSLGVEYNG  300
EVENRKWLRY LENELGLEPA RDGKQQNLLE DAAESFLVPE NYQFEIPMKP EVNSGMEYYH  360
LWPSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56160.1	6e-75	MYB family protein