PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021651007.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 441aa MW: 49464.7 Da PI: 8.5794

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021651007.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.6	5.1e-06	58	80	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H XP_021651007.1 58 YVCEICNQGFQRDQNLQMHRRRH 80 9*********************9 PP
2	zf-C2H2	16.1	3.3e-05	135	157	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k + +s++k H++t+ XP_021651007.1 135 WVCEKCSKGYAVQSDYKAHLKTC 157 58*******************98 PP
3	zf-C2H2	11	0.0014	165	183	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr +++ H+ t+ XP_021651007.1 165 DCGRVFSRVESFIEHQDTC 183 9***************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MLANNSSSSF PSSSSEPFSC LETATNNNKR KRRPAGTPDP DAEVVSLSPK TLLESDRYVC 60 EICNQGFQRD QNLQMHRRRH KVPWKLLKRE TQVVKKRVFV CPEPSCLHHD PCHALGDLVG 120 IKKHFRRKHS NHKQWVCEKC SKGYAVQSDY KAHLKTCGTR GHSCDCGRVF SRVESFIEHQ 180 DTCNMGRLRP ELQSLQPACL SRTASSPSPS TDTNFGTPPW PPLVIPRPTT DAIFLSPTVD 240 KKHYNLELQL SSTSNLLEVS VSPKRDDNHS TQLQLSIGSS DFSEKNDSSN MTCTTKDAGK 300 LSPGESNNNS EKPDLPASKV KEAAWEQLRL AMAEKAYAEE ARQRAKRQIE LAEQEFANAK 360 RIRQQAQVEL DKAQALREHA MKQINSTILQ ITCHACKQQF QARTSPDDQN SLVLSYMSSA 420 ITEGEVENHN LAKTACNLPI N

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MLANNSSSSF PSSSSEPFSC LETATNNNKR KRRPAGTPDP DAEVVSLSPK TLLESDRYVC  60
EICNQGFQRD QNLQMHRRRH KVPWKLLKRE TQVVKKRVFV CPEPSCLHHD PCHALGDLVG  120
IKKHFRRKHS NHKQWVCEKC SKGYAVQSDY KAHLKTCGTR GHSCDCGRVF SRVESFIEHQ  180
DTCNMGRLRP ELQSLQPACL SRTASSPSPS TDTNFGTPPW PPLVIPRPTT DAIFLSPTVD  240
KKHYNLELQL SSTSNLLEVS VSPKRDDNHS TQLQLSIGSS DFSEKNDSSN MTCTTKDAGK  300
LSPGESNNNS EKPDLPASKV KEAAWEQLRL AMAEKAYAEE ARQRAKRQIE LAEQEFANAK  360
RIRQQAQVEL DKAQALREHA MKQINSTILQ ITCHACKQQF QARTSPDDQN SLVLSYMSSA  420
ITEGEVENHN LAKTACNLPI N

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	29	34	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	1e-161	C2H2 family protein